Sub-family  

Parent family
HOM000031
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (4 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (11 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (5 genes)
ptr
Populus trichocarpa (4 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (3 genes)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (4 genes)



The gene family ORTHO000309 has 70 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 70 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL8G02250 aly name=fgenesh2_kg.8__190__AT5G46050.1;pid=494374;prot=eq;tid=494374 + scaffold_8 No
AL8G02260 aly name=Al_scaffold_0008_225;pid=883961;prot=eq;tid=915474 + scaffold_8 No
AT5G46040 ath Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Major facilitator superfamily protein transcript=eq;prot=eq; - 5 No
AT5G46050 ath Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.;peptide transporter 3 transcript=eq;prot=eq; - 5 No
BD1G75820 bdi L-histidine transmembrane transporter activity, peptide:hydrogen symporter activity (Blast2GO) pid=Bradi1g75820.1;tid=Bradi1g75820.1;GeneName=Bradi1g75820;transcript=eq;prot=eq + Bd1 No
BD3G28400 bdi L-histidine transmembrane transporter activity (Blast2GO) pid=Bradi3g28400.1;tid=Bradi3g28400.1;GeneName=Bradi3g28400;transcript=eq;prot=eq + Bd3 No
BD3G28410 bdi proton-dependent oligopeptide secondary active transmembrane transporter activity (Blast2GO) pid=Bradi3g28410.1;tid=Bradi3g28410.1;GeneName=Bradi3g28410;transcript=eq;prot=eq + Bd3 No
BD3G28417 bdi pid=Bradi3g28417.1;tid=Bradi3g28417.1;GeneName=Bradi3g28417;transcript=eq;prot=eq + Bd3 No
CP00044G00190 cpa name=evm.TU.supercontig_44.19;pid=evm.TU.supercontig_44.19;prot=eq;transcript=eq - supercontig_44 No
CP00165G00440 cpa name=evm.TU.supercontig_165.44;pid=evm.TU.supercontig_165.44;prot=eq;transcript=eq - supercontig_165 No
FV2G09880 fve Peptide transporter PTR3-A (AtPTR3) (putative) transcript=eq;prot=eq;pid=gene08304 - LG2 No
FV2G09890 fve Peptide transporter PTR3-A (AtPTR3) (similar to) transcript=eq;prot=eq;pid=gene08305 - LG2 No
FV4G01150 fve Peptide transporter PTR3-A (AtPTR3) (putative) transcript=eq;prot=eq;pid=gene11540 + LG4 No
FV4G01170 fve Peptide transporter PTR3-A (AtPTR3) (putative) transcript=eq;prot=eq;pid=gene11542 + LG4 No
GM02G00600 gma 02 pid=16246512;transcript=eq;prot=eq;name=Glyma02g00600.1 - Gm02 No
GM03G32280 gma 03 pid=16253047;transcript=eq;prot=eq;name=Glyma03g32280.1 - Gm03 No
GM10G00800 gma 10 pid=16278141;transcript=eq;prot=eq;name=Glyma10g00800.1 + Gm10 No
GM10G00810 gma 10 pid=16278142;transcript=eq;prot=eq;name=Glyma10g00810.1 + Gm10 No
GM10G32750 gma 10 pid=16280731;transcript=eq;prot=eq;name=Glyma10g32750.1 + Gm10 No
GM19G35020 gma 19 pid=16313798;transcript=eq;prot=eq;name=Glyma19g35020.1 - Gm19 No
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