Sub-family  

Parent family
HOM000017
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (4 genes)
ath
Arabidopsis thaliana (4 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (5 genes)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (7 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (5 genes)



The gene family ORTHO000288 has 71 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 71 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G06380 aly name=Al_scaffold_0001_622;pid=878855;prot=eq;tid=910368 - scaffold_1 No
AL5G23590 aly name=scaffold_502453.1;pid=906749;prot=eq;tid=938262 - scaffold_5 No
AL6G00080 aly name=fgenesh2_kg.6__8__AT5G01950.1;pid=486874;prot=eq;tid=486874 + scaffold_6 No
AL7G34440 aly name=fgenesh2_kg.7__3153__AT5G37450.1;pid=493720;prot=eq;tid=493720 - scaffold_7 No
AT1G06840 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 1 No
AT3G53590 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 204820 Blast hits to 136317 proteins in 4471 species: Archae - 132; Bacteria - 20901; Metazoa - 59546; Fungi - 10595; Plants - 91366; Viruses - 374; Other Eukaryotes - 21906 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 3 No
AT5G01950 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 5 No
AT5G37450 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 5 No
BD2G22140 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-VIII-1 pid=Bradi2g22140.1;tid=Bradi2g22140.1;GeneName=Bradi2g22140;transcript=eq;prot=eq - Bd2 No
BD2G53400 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-VIII-1 pid=Bradi2g53400.1;tid=Bradi2g53400.1;GeneName=Bradi2g53400;transcript=eq;prot=eq - Bd2 No
BD2G62790 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-VIII-1 pid=Bradi2g62790.1;tid=Bradi2g62790.1;GeneName=Bradi2g62790;transcript=eq;prot=eq + Bd2 No
CP00002G02530 cpa name=evm.TU.supercontig_2.253;pid=evm.TU.supercontig_2.253;prot=eq;transcript=eq - supercontig_2 No
FV3G30860 fve Probable LRR receptor-like serine/threonine-protein kinase At1g06840, Precursor (putative) transcript=eq;prot=eq;pid=gene28058 - LG3 No
FV6G08150 fve Probable LRR receptor-like serine/threonine-protein kinase At1g06840, Precursor transcript=eq;prot=eq;pid=gene13584 - LG6 No
GM02G40380 gma 02 pid=16249674;transcript=eq;prot=eq;name=Glyma02g40380.1 + Gm02 No
GM09G40880 gma 09 pid=16277917;transcript=eq;prot=eq;name=Glyma09g40880.1 - Gm09 No
GM11G31510 gma 11 pid=16285055;transcript=eq;prot=eq;name=Glyma11g31510.1 + Gm11 No
GM14G38650 gma 14 pid=16296848;transcript=eq;prot=eq;name=Glyma14g38650.1 + Gm14 No
GM14G38670 gma 14 pid=16296849;transcript=eq;prot=eq;name=Glyma14g38670.1 + Gm14 No
GM18G05710 gma 18 pid=16308025;transcript=eq;prot=eq;name=Glyma18g05710.1 - Gm18 No
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