Sub-family  

Parent family
HOM000397
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (3 genes)
ath
Arabidopsis thaliana (3 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (3 genes)
gma
Glycine max (8 genes)
lja
Lotus japonicus (4 genes)
mdo
Malus domestica (7 genes)
mes
Manihot esculenta (4 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (3 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (3 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (3 genes)



The gene family ORTHO000281 has 72 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 72 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G14720 aly name=fgenesh2_kg.1__1513__AT1G13980.1;pid=471559;prot=eq;tid=471559 + scaffold_1 No
AL6G19890 aly name=fgenesh2_kg.6__1989__AT5G19610.1;pid=488855;prot=eq;tid=488855 - scaffold_6 No
AL7G38810 aly name=fgenesh2_kg.7__3470__AT5G39500.1;pid=494037;prot=eq;tid=494037 - scaffold_7 No
AT1G13980 ath Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.;sec7 domain-containing protein transcript=eq;prot=eq; + 1 No
AT5G19610 ath GNOM-like 2 (GNL2); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: pollen germination; LOCATED IN: intracellular; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;GNOM-like 2 transcript=eq;prot=eq; - 5 No
AT5G39500 ath Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology.;GNOM-like 1 transcript=eq;prot=eq; + 5 No
BD1G12920 bdi phosphatidylinositol binding, phosphatidylinositol-3,4,5-triphosphate binding (Blast2GO) pid=Bradi1g12920.1;tid=Bradi1g12920.1;GeneName=Bradi1g12920;transcript=eq;prot=eq - Bd1 No
BD1G74210 bdi guanine nucleotide transmembrane transporter activity (Blast2GO) pid=Bradi1g74210.1;tid=Bradi1g74210.1;GeneName=Bradi1g74210;transcript=eq;prot=eq + Bd1 No
BD2G48310 bdi guanine nucleotide transmembrane transporter activity (Blast2GO) pid=Bradi2g48310.1;tid=Bradi2g48310.1;GeneName=Bradi2g48310;transcript=eq;prot=eq + Bd2 No
CP00001G00640 cpa name=evm.TU.supercontig_1.64;pid=evm.TU.supercontig_1.64;prot=eq;transcript=eq - supercontig_1 No
CP00014G01190 cpa name=evm.TU.supercontig_14.119;pid=evm.TU.supercontig_14.119;prot=eq;transcript=eq - supercontig_14 No
CP00023G01000 cpa name=evm.TU.supercontig_23.100;pid=evm.TU.supercontig_23.100;prot=eq;transcript=eq + supercontig_23 No
CR07G04550 cre name=SAN_Chlre2_kg.scaffold_50000092;pid=195583;prot=eq;tid=195583;transcript=eq + chromosome_7 No
FV1G00820 fve Pattern formation protein EMB30 (probable) transcript=eq;prot=eq;pid=gene02092 - LG1 No
FV7G18930 fve Pattern formation protein EMB30 (putative) transcript=eq;prot=eq;pid=gene07469 - LG7 No
FV7G25790 fve Pattern formation protein EMB30 (similar to) transcript=eq;prot=eq;pid=gene26324 + LG7 No
GM02G41730 gma 02 pid=16249827;transcript=eq;prot=eq;name=Glyma02g41730.1 + Gm02 No
GM07G09670 gma 07 pid=16266775;transcript=eq;prot=eq;name=Glyma07g09670.1 + Gm07 No
GM09G32140 gma 09 pid=16276904;transcript=eq;prot=eq;name=Glyma09g32140.1 - Gm09 No
GM11G34310 gma 11 pid=16285341;transcript=eq;prot=eq;name=Glyma11g34310.1 - Gm11 No
<< previous
1 | 2 | 3 | 4 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier