Sub-family  

Parent family
HOM000105
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (3 genes)
gma
Glycine max (10 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (4 genes)
mtr
Medicago truncatula (3 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (6 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (6 genes)



The gene family ORTHO000238 has 77 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 77 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G31370 aly name=fgenesh2_kg.1__3210__AT1G30330.2;pid=473256;prot=eq;tid=473256 - scaffold_1 No
AL7G34050 aly name=fgenesh2_kg.7__3131__AT5G37020.1;pid=493698;prot=eq;tid=493698 - scaffold_7 No
AT1G30330 ath Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.;auxin response factor 6 transcript=eq;prot=eq; - 1 No
AT5G37020 ath Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.;auxin response factor 8 transcript=eq;prot=eq; + 5 No
BD1G32547 bdi pid=Bradi1g32547.1;tid=Bradi1g32547.1;GeneName=Bradi1g32547;transcript=eq;prot=eq + Bd1 No
BD3G04920 bdi auxin response factor (ARF) pid=Bradi3g04920.1;tid=Bradi3g04920.1;GeneName=Bradi3g04920;transcript=eq;prot=eq + Bd3 No
BD4G01730 bdi auxin response factor (ARF) pid=Bradi4g01730.1;tid=Bradi4g01730.1;GeneName=Bradi4g01730;transcript=eq;prot=eq + Bd4 No
BD5G25767 bdi pid=Bradi5g25767.1;tid=Bradi5g25767.1;GeneName=Bradi5g25767;transcript=eq;prot=eq - Bd5 No
CP00017G00460 cpa name=evm.TU.supercontig_17.46;pid=evm.TU.supercontig_17.46;prot=eq;transcript=eq - supercontig_17 No
CP00017G00470 cpa name=evm.TU.supercontig_17.47;pid=evm.TU.supercontig_17.47;prot=eq;transcript=eq - supercontig_17 No
FV1G28300 fve Auxin response factor 8 (putative) transcript=eq;prot=eq;pid=gene31631 + LG1 No
FV3G05860 fve Auxin response factor 6 (similar to) transcript=eq;prot=eq;pid=gene30394 - LG3 No
FV6G51050 fve Auxin response factor 6 (similar to) transcript=eq;prot=eq;pid=gene22728 + LG6 No
GM02G40650 gma 02 pid=16249707;transcript=eq;prot=eq;name=Glyma02g40650.1 - Gm02 No
GM02G45100 gma 02 pid=16250234;transcript=eq;prot=eq;name=Glyma02g45100.1 + Gm02 No
GM05G27580 gma 05 pid=16259834;transcript=eq;prot=eq;name=Glyma05g27580.1 - Gm05 No
GM08G10550 gma 08 pid=16270663;transcript=eq;prot=eq;name=Glyma08g10550.1 - Gm08 No
GM11G31940 gma 11 pid=16285100;transcript=eq;prot=eq;name=Glyma11g31940.1 - Gm11 No
GM13G29320 gma 13 pid=16291978;transcript=eq;prot=eq;name=Glyma13g29320.1 + Gm13 No
GM14G03650 gma 14 pid=16294246;transcript=eq;prot=eq;name=Glyma14g03650.1 - Gm14 No
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