Sub-family  

Parent family
HOM000005
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (3 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (5 genes)
gma
Glycine max (6 genes)
mdo
Malus domestica (6 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (7 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (7 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (8 genes)
sbi
Sorghum bicolor (5 genes)
tca
Theobroma cacao (5 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family ORTHO000230 has 78 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 4, showing 20 records out of 78 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G08820 aly name=scaffold_200899.1;pid=893825;prot=eq;tid=925338 + scaffold_2 No
AL2G08850 aly name=fgenesh2_kg.2__625__AT1G64940.1;pid=475495;prot=eq;tid=475495 + scaffold_2 No
AT1G64900 ath Encodes cytochrome P450 (CYP89A2).;cytochrome P450, family 89, subfamily A, polypeptide 2 transcript=eq;prot=eq; + 1 No
AT1G64930 ath member of CYP89A;cytochrome P450, family 87, subfamily A, polypeptide 7 transcript=eq;prot=eq; + 1 No
AT1G64940 ath member of CYP89A;cytochrome P450, family 87, subfamily A, polypeptide 6 transcript=eq;prot=eq; + 1 No
AT1G64950 ath member of CYP89A;cytochrome P450, family 89, subfamily A, polypeptide 5 transcript=eq;prot=eq; + 1 No
AT2G12190 ath Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, leaf whorl, male gametophyte, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33026 Blast hits to 32861 proteins in 1697 species: Archae - 49; Bacteria - 3625; Metazoa - 11744; Fungi - 7006; Plants - 9305; Viruses - 3; Other Eukaryotes - 1294 (source: NCBI BLink).;Cytochrome P450 superfamily protein transcript=eq;prot=eq; - 2 No
BD3G17090 bdi pid=Bradi3g17090.1;tid=Bradi3g17090.1;GeneName=Bradi3g17090;transcript=eq;prot=eq + Bd3 No
BD3G30510 bdi steroid 17-alpha-monooxygenase activity (Blast2GO) pid=Bradi3g30510.1;tid=Bradi3g30510.1;GeneName=Bradi3g30510;transcript=eq;prot=eq - Bd3 No
BD3G30520 bdi pid=Bradi3g30520.1;tid=Bradi3g30520.1;GeneName=Bradi3g30520;transcript=eq;prot=eq + Bd3 No
CP00043G01370 cpa name=evm.TU.supercontig_43.137;pid=evm.TU.supercontig_43.137;prot=eq;transcript=eq - supercontig_43 No
FV3G40560 fve Cytochrome P450 89A2 (similar to) transcript=eq;prot=eq;pid=gene07695 + LG3 No
FV4G11710 fve Cytochrome P450 89A2 (putative) transcript=eq;prot=eq;pid=gene06716 + LG4 No
FV5G29180 fve Cytochrome P450 89A2 (similar to) transcript=eq;prot=eq;pid=gene31519 - LG5 No
FV7G38360 fve Cytochrome P450 89A2 (putative) transcript=eq;prot=eq;pid=gene13250 - LG7 No
FV7G38390 fve Cytochrome P450 89A2 (similar to) transcript=eq;prot=eq;pid=gene13253 - LG7 No
GM07G34540 gma 07 pid=16268717;transcript=eq;prot=eq;name=Glyma07g34540.1 + Gm07 No
GM07G34550 gma 07 pid=16268719;transcript=eq;prot=eq;name=Glyma07g34550.1 + Gm07 No
GM07G34560 gma 07 pid=16268720;transcript=eq;prot=eq;name=Glyma07g34560.1 + Gm07 No
GM20G02290 gma 20 pid=16315247;transcript=eq;prot=eq;name=Glyma20g02290.1 + Gm20 No
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