Sub-family 
- Id
- ORTHO000173
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000499
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (6 genes)
- ath
- Arabidopsis thaliana (6 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (3 genes)
- fve
- Fragaria vesca (3 genes)
- gma
- Glycine max (12 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (3 genes)
- mes
- Manihot esculenta (4 genes)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (4 genes)
- osaindica
- Oryza sativa ssp. indica (4 genes)
- ppa
- Physcomitrella patens (4 genes)
- ptr
- Populus trichocarpa (6 genes)
- rco
- Ricinus communis (3 genes)
- sbi
- Sorghum bicolor (5 genes)
- smo
- Selaginella moellendorffii (2 genes)
- tca
- Theobroma cacao (3 genes)
- vvi
- Vitis vinifera (4 genes)
- zma
- Zea mays (7 genes)
The gene family ORTHO000173 has 87 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO000173
Page 1 of 5, showing 20 records out of 87 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G13790 | aly | name=fgenesh2_kg.1__1424__AT1G13170.1;pid=471470;prot=eq;tid=471470 | - | scaffold_1 | No | |
| AL4G15780 | aly | name=fgenesh2_kg.4__1086__AT2G31020.1;pid=482026;prot=eq;tid=482026 | + | scaffold_4 | No | |
| AL4G15790 | aly | name=scaffold_401617.1;pid=902116;prot=eq;tid=933629 | + | scaffold_4 | No | |
| AL6G30320 | aly | name=fgenesh2_kg.6__2867__AT4G08180.3;pid=489733;prot=eq;tid=489733 | + | scaffold_6 | No | |
| AL6G35720 | aly | name=fgenesh2_kg.6__3184__AT4G12460.1;pid=490050;prot=eq;tid=490050 | + | scaffold_6 | No | |
| AL7G19720 | aly | name=fgenesh2_kg.7__2048__AT4G22540.1;pid=492615;prot=eq;tid=492615 | + | scaffold_7 | No | |
| AT1G13170 | ath | OSBP(oxysterol binding protein)-related protein 1D (ORP1D); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1).;OSBP(oxysterol binding protein)-related protein 1D | transcript=eq;prot=eq; | - | 1 | No |
| AT2G31020 | ath | OSBP(oxysterol binding protein)-related protein 1A (ORP1A); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1C (TAIR:AT4G08180.1); Has 2870 Blast hits to 2614 proteins in 228 species: Archae - 2; Bacteria - 10; Metazoa - 1527; Fungi - 710; Plants - 301; Viruses - 8; Other Eukaryotes - 312 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 1A | transcript=eq;prot=eq; | + | 2 | No |
| AT2G31030 | ath | OSBP(oxysterol binding protein)-related protein 1B (ORP1B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2291 Blast hits to 2240 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1139; Fungi - 602; Plants - 285; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 1B | transcript=eq;prot=eq; | + | 2 | No |
| AT4G08180 | ath | OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 2760 Blast hits to 2567 proteins in 218 species: Archae - 0; Bacteria - 4; Metazoa - 1466; Fungi - 697; Plants - 301; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 1C | transcript=eq;prot=eq; | + | 4 | No |
| AT4G12460 | ath | OSBP(oxysterol binding protein)-related protein 2B (ORP2B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2A (TAIR:AT4G22540.1); Has 2708 Blast hits to 2476 proteins in 219 species: Archae - 0; Bacteria - 2; Metazoa - 1436; Fungi - 690; Plants - 296; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 2B | transcript=eq;prot=eq; | + | 4 | No |
| AT4G22540 | ath | OSBP(oxysterol binding protein)-related protein 2A (ORP2A); CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 2B (TAIR:AT4G12460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;OSBP(oxysterol binding protein)-related protein 2A | transcript=eq;prot=eq; | - | 4 | No |
| BD1G11027 | bdi | pid=Bradi1g11027.1;tid=Bradi1g11027.1;GeneName=Bradi1g11027;transcript=eq;prot=eq | + | Bd1 | No | |
| BD1G78320 | bdi | sterol carrier activity (Blast2GO) | pid=Bradi1g78320.1;tid=Bradi1g78320.1;GeneName=Bradi1g78320;transcript=eq;prot=eq | + | Bd1 | No |
| BD3G16890 | bdi | sterol carrier activity (Blast2GO) | pid=Bradi3g16890.2;tid=Bradi3g16890.2;GeneName=Bradi3g16890;transcript=eq;prot=eq | - | Bd3 | No |
| BD3G33020 | bdi | sterol carrier activity (Blast2GO) | pid=Bradi3g33020.1;tid=Bradi3g33020.1;GeneName=Bradi3g33020;transcript=eq;prot=eq | + | Bd3 | No |
| BD4G39060 | bdi | sterol carrier activity (Blast2GO) | pid=Bradi4g39060.1;tid=Bradi4g39060.1;GeneName=Bradi4g39060;transcript=eq;prot=eq | + | Bd4 | No |
| CP00033G00740 | cpa | name=evm.TU.supercontig_33.74;pid=evm.TU.supercontig_33.74;prot=eq;transcript=eq | - | supercontig_33 | No | |
| CP00036G00080 | cpa | name=evm.TU.supercontig_36.8;pid=evm.TU.supercontig_36.8;prot=eq;transcript=eq | - | supercontig_36 | No | |
| CP01025G00010 | cpa | name=evm.TU.supercontig_1025.1;pid=evm.TU.supercontig_1025.1;prot=eq;transcript=eq | - | supercontig_1025 | No |