Sub-family 
- Id
- ORTHO000139
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000009
- Keywords
-
Overview of gene family content
- cpa
- Carica papaya (3 genes)
- fve
- Fragaria vesca (8 genes)
- gma
- Glycine max (7 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (17 genes)
- mes
- Manihot esculenta (24 genes)
- mtr
- Medicago truncatula (11 genes)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (2 genes)
- ptr
- Populus trichocarpa (8 genes)
- rco
- Ricinus communis (1 gene)
- tca
- Theobroma cacao (10 genes)
- vvi
- Vitis vinifera (3 genes)
The gene family ORTHO000139 has 96 genes in 13 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : ORTHO000139
Page 1 of 5, showing 20 records out of 96 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| CP00092G00420 | cpa | name=evm.TU.supercontig_92.42;pid=evm.TU.supercontig_92.42;prot=eq;transcript=eq | - | supercontig_92 | No | |
| CP00092G00430 | cpa | name=evm.TU.supercontig_92.43;pid=evm.TU.supercontig_92.43;prot=eq;transcript=eq | + | supercontig_92 | No | |
| CP00092G00440 | cpa | name=evm.TU.supercontig_92.44;pid=evm.TU.supercontig_92.44;prot=eq;transcript=eq | + | supercontig_92 | No | |
| FV0G39760 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene34521 | - | scf0513124 | No |
| FV0G39770 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene34522 | - | scf0513124 | No |
| FV0G39810 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene34524 | - | scf0513124 | No |
| FV1G19750 | fve | Putative disease resistance protein RGA4 (probable) | transcript=eq;prot=eq;pid=gene34130 | + | LG1 | No |
| FV2G13230 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene34934 | - | LG2 | No |
| FV5G17150 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene09429 | - | LG5 | No |
| FV7G36640 | fve | Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (probable) | transcript=eq;prot=eq;pid=gene12900 | - | LG7 | No |
| FV7G36680 | fve | Putative disease resistance protein RGA3 (probable) | transcript=eq;prot=eq;pid=gene35170 | - | LG7 | No |
| GM02G32030 | gma | 02 | pid=16248962;transcript=eq;prot=eq;name=Glyma02g32030.1 | - | Gm02 | No |
| GM06G17560 | gma | 06 | pid=16263299;transcript=eq;prot=eq;name=Glyma06g17560.1 | - | Gm06 | No |
| GM19G32080 | gma | 19 | pid=16313463;transcript=eq;prot=eq;name=Glyma19g32080.1 | + | Gm19 | No |
| GM19G32090 | gma | 19 | pid=16313464;transcript=eq;prot=eq;name=Glyma19g32090.1 | + | Gm19 | No |
| GM19G32110 | gma | 19 | pid=16313466;transcript=eq;prot=eq;name=Glyma19g32110.1 | + | Gm19 | No |
| GM19G32150 | gma | 19 | pid=16313469;transcript=eq;prot=eq;name=Glyma19g32150.1 | + | Gm19 | No |
| GM19G32180 | gma | 19 | pid=16313471;transcript=eq;prot=eq;name=Glyma19g32180.1 | + | Gm19 | No |
| LJ0G086200 | lja | partial;prot=eq;transcript=eq;scaffold=LjSGA_028362;name=LjSGA_028362.1 | + | LjSGA_028362 | No | |
| MD00G193130 | mdo | transcript=eq;prot=eq;pid=MDP0000284699;tid=MDP0000284699;contig=MDC008290.331 | - | MDC008290.331 | No |