Sub-family  

Parent family
HOM000325
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (4 genes)
cpa
Carica papaya (4 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (5 genes)
gma
Glycine max (9 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (5 genes)
mes
Manihot esculenta (6 genes)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (4 genes)
osaindica
Oryza sativa ssp. indica (4 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (4 genes)
sbi
Sorghum bicolor (4 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (4 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (4 genes)
zma
Zea mays (4 genes)



The gene family ORTHO000127 has 100 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 100 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G12300 aly name=fgenesh1_pm.C_scaffold_1001006;pid=312226;prot=eq;tid=312226 - scaffold_1 No
AL1G33280 aly name=fgenesh2_kg.1__3346__AT1G32090.1;pid=473392;prot=eq;tid=473392 - scaffold_1 No
AL2G03190 aly name=fgenesh1_pg.C_scaffold_2000249;pid=338150;prot=eq;tid=338150 + scaffold_2 No
AL3G23750 aly name=fgenesh1_pg.C_scaffold_3002075;pid=342312;prot=eq;tid=342312 - scaffold_3 No
AL6G36230 aly name=scaffold_603754.1;pid=911697;prot=eq;tid=943210 + scaffold_6 No
AL6G38330 aly name=fgenesh1_pg.C_scaffold_6003128;pid=352535;prot=eq;tid=352535 - scaffold_6 No
AL7G20200 aly name=fgenesh2_kg.7__2091__AT4G22120.2;pid=492658;prot=eq;tid=492658 + scaffold_7 No
AL7G28340 aly name=fgenesh2_kg.7__2779__AT4G15430.1;pid=493346;prot=eq;tid=493346 - scaffold_7 No
AT1G11960 ath ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G62320.1); Has 1452 Blast hits to 1271 proteins in 185 species: Archae - 0; Bacteria - 4; Metazoa - 184; Fungi - 702; Plants - 435; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; - 1 No
AT1G32090 ath early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1524 Blast hits to 1296 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 776; Plants - 431; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).;early-responsive to dehydration stress protein (ERD4) transcript=eq;prot=eq; - 1 No
AT1G62320 ath ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT1G11960.1); Has 1443 Blast hits to 1265 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 708; Plants - 430; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; - 1 No
AT3G21620 ath ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G15430.2); Has 1522 Blast hits to 1336 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 725; Plants - 435; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; - 3 No
AT4G02900 ath ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; + 4 No
AT4G04340 ath ERD (early-responsive to dehydration stress) family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G22120.6); Has 1469 Blast hits to 1289 proteins in 193 species: Archae - 0; Bacteria - 4; Metazoa - 185; Fungi - 721; Plants - 437; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; + 4 No
AT4G15430 ath ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1447 Blast hits to 1280 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 705; Plants - 434; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; + 4 No
AT4G22120 ath ERD (early-responsive to dehydration stress) family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G04340.1); Has 1475 Blast hits to 1296 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 716; Plants - 435; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink).;ERD (early-responsive to dehydration stress) family protein transcript=eq;prot=eq; - 4 No
BD2G26180 bdi pid=Bradi2g26180.1;tid=Bradi2g26180.1;GeneName=Bradi2g26180;transcript=eq;prot=eq + Bd2 No
BD2G39230 bdi pid=Bradi2g39230.1;tid=Bradi2g39230.1;GeneName=Bradi2g39230;transcript=eq;prot=eq + Bd2 No
BD2G40490 bdi pid=Bradi2g40490.3;tid=Bradi2g40490.3;GeneName=Bradi2g40490;transcript=eq;prot=eq - Bd2 No
BD3G34540 bdi pid=Bradi3g34540.1;tid=Bradi3g34540.1;GeneName=Bradi3g34540;transcript=eq;prot=eq - Bd3 No
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