Sub-family  

Parent family
HOM000002
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (6 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (16 genes)
lja
Lotus japonicus (5 genes)
mdo
Malus domestica (9 genes)
mes
Manihot esculenta (8 genes)
mtr
Medicago truncatula (4 genes)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (6 genes)
ptr
Populus trichocarpa (10 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (6 genes)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (6 genes)
vvi
Vitis vinifera (5 genes)
zma
Zea mays (7 genes)



The gene family ORTHO000086 has 126 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 7, showing 20 records out of 126 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G35470 aly name=fgenesh2_kg.1__3517__AT1G34110.1;pid=473563;prot=eq;tid=473563 - scaffold_1 No
AL3G26920 aly name=fgenesh2_kg.3__2604__AT3G24240.1;pid=479903;prot=eq;tid=479903 - scaffold_3 No
AL7G15530 aly name=scaffold_701647.1;pid=913905;prot=eq;tid=945418 + scaffold_7 No
AL8G12170 aly name=scaffold_801229.1;pid=917829;prot=eq;tid=949342 + scaffold_8 No
AL8G21440 aly name=Al_scaffold_0008_2043;pid=885779;prot=eq;tid=917292 + scaffold_8 No
AT1G34110 ath Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 229810 Blast hits to 121355 proteins in 3638 species: Archae - 147; Bacteria - 18757; Metazoa - 70622; Fungi - 9447; Plants - 104379; Viruses - 381; Other Eukaryotes - 26077 (source: NCBI BLink).;Leucine-rich receptor-like protein kinase family protein transcript=eq;prot=eq; - 1 No
AT3G24240 ath Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase family protein (TAIR:AT5G48940.1); Has 246558 Blast hits to 135557 proteins in 3810 species: Archae - 176; Bacteria - 24262; Metazoa - 71588; Fungi - 10499; Plants - 111580; Viruses - 361; Other Eukaryotes - 28092 (source: NCBI BLink).;Leucine-rich repeat receptor-like protein kinase family protein transcript=eq;prot=eq; + 3 No
AT4G26540 ath Leucine-rich repeat receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G56040.2); Has 218237 Blast hits to 120439 proteins in 3896 species: Archae - 151; Bacteria - 20470; Metazoa - 64079; Fungi - 7848; Plants - 101542; Viruses - 308; Other Eukaryotes - 23839 (source: NCBI BLink).;Leucine-rich repeat receptor-like protein kinase family protein transcript=eq;prot=eq; - 4 No
AT5G48940 ath Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Leucine-rich repeat transmembrane protein kinase family protein transcript=eq;prot=eq; + 5 No
AT5G56040 ath Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 231331 Blast hits to 125911 proteins in 4380 species: Archae - 141; Bacteria - 23597; Metazoa - 71861; Fungi - 8804; Plants - 101197; Viruses - 340; Other Eukaryotes - 25391 (source: NCBI BLink).;Leucine-rich receptor-like protein kinase family protein transcript=eq;prot=eq; + 5 No
BD1G37190 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi1g37190.1;tid=Bradi1g37190.1;GeneName=Bradi1g37190;transcript=eq;prot=eq + Bd1 No
BD2G04330 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi2g04330.1;tid=Bradi2g04330.1;GeneName=Bradi2g04330;transcript=eq;prot=eq + Bd2 No
BD2G34380 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi2g34380.1;tid=Bradi2g34380.1;GeneName=Bradi2g34380;transcript=eq;prot=eq + Bd2 No
BD3G39150 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi3g39150.1;tid=Bradi3g39150.1;GeneName=Bradi3g39150;transcript=eq;prot=eq + Bd3 No
BD4G33160 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi4g33160.1;tid=Bradi4g33160.1;GeneName=Bradi4g33160;transcript=eq;prot=eq + Bd4 No
BD5G01210 bdi leucine-rich repeat protein kinase, putative, expressed, subfamily LRR-XI pid=Bradi5g01210.1;tid=Bradi5g01210.1;GeneName=Bradi5g01210;transcript=eq;prot=eq - Bd5 No
CP00008G01770 cpa name=evm.TU.supercontig_8.178;pid=evm.TU.supercontig_8.178;prot=eq;transcript=eq + supercontig_8 No
CP00012G01080 cpa name=evm.TU.supercontig_12.108;pid=evm.TU.supercontig_12.108;prot=eq;transcript=eq - supercontig_12 No
CP00026G01150 cpa name=evm.TU.supercontig_26.115;pid=evm.TU.supercontig_26.115;prot=eq;transcript=eq + supercontig_26 No
CP00049G00490 cpa name=evm.TU.supercontig_49.49;pid=evm.TU.supercontig_49.49;prot=eq;transcript=eq + supercontig_49 No
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