Sub-family 
- Id
- ORTHO000077
- Method
- BLASTP E_value=1e-05 hits=500 ORTHOMCL I=2
- Sequences
- Parent family
- HOM000116
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (11 genes)
- ath
- Arabidopsis thaliana (9 genes)
- bdi
- Brachypodium distachyon (8 genes)
- cpa
- Carica papaya (2 genes)
- fve
- Fragaria vesca (9 genes)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (3 genes)
- mdo
- Malus domestica (11 genes)
- mes
- Manihot esculenta (4 genes)
- mtr
- Medicago truncatula (2 genes)
- osa
- Oryza sativa ssp. japonica (6 genes)
- osaindica
- Oryza sativa ssp. indica (10 genes)
- ptr
- Populus trichocarpa (23 genes)
- rco
- Ricinus communis (6 genes)
- sbi
- Sorghum bicolor (6 genes)
- tca
- Theobroma cacao (8 genes)
- vvi
- Vitis vinifera (11 genes)
- zma
- Zea mays (3 genes)
The gene family ORTHO000077 has 134 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : ORTHO000077
Page 1 of 7, showing 20 records out of 134 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL0G02670 | aly | name=Al_scaffold_0041_1;pid=856370;prot=eq;tid=887883 | - | scaffold_41 | No | |
AL0G02680 | aly | name=Al_scaffold_0041_2;pid=856371;prot=eq;tid=887884 | - | scaffold_41 | No | |
AL4G05180 | aly | name=fgenesh1_pg.C_scaffold_4000393;pid=344051;prot=eq;tid=344051 | - | scaffold_4 | No | |
AL4G05190 | aly | name=Al_scaffold_0004_497;pid=868334;prot=eq;tid=899847 | - | scaffold_4 | No | |
AL4G05200 | aly | name=scaffold_400534.1;pid=901033;prot=eq;tid=932546 | - | scaffold_4 | No | |
AL4G05230 | aly | name=fgenesh1_pm.C_scaffold_4000336;pid=320279;prot=eq;tid=320279 | - | scaffold_4 | No | |
AL4G05250 | aly | name=Al_scaffold_0004_503;pid=868340;prot=eq;tid=899853 | - | scaffold_4 | No | |
AL4G13620 | aly | name=fgenesh2_kg.4__889__AT2G29110.1;pid=481829;prot=eq;tid=481829 | - | scaffold_4 | No | |
AL6G10980 | aly | name=fgenesh1_pm.C_scaffold_6000870;pid=325650;prot=eq;tid=325650 | - | scaffold_6 | No | |
AL6G10990 | aly | name=Al_scaffold_0006_1032;pid=861523;prot=eq;tid=893036 | - | scaffold_6 | No | |
AL7G09890 | aly | name=fgenesh2_kg.7__1004__AT5G27100.1;pid=491571;prot=eq;tid=491571 | + | scaffold_7 | No | |
AT2G24710 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.3 | transcript=eq;prot=eq; | - | 2 | No |
AT2G24720 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.2 | transcript=eq;prot=eq; | - | 2 | No |
AT2G29100 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.9 | transcript=eq;prot=eq; | - | 2 | No |
AT2G29110 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.8 | transcript=eq;prot=eq; | - | 2 | No |
AT2G29120 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.7 | transcript=eq;prot=eq; | - | 2 | No |
AT4G31710 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.4 | transcript=eq;prot=eq; | + | 4 | No |
AT5G11180 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.6 | transcript=eq;prot=eq; | - | 5 | No |
AT5G11210 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.5 | transcript=eq;prot=eq; | - | 5 | No |
AT5G27100 | ath | member of Putative ligand-gated ion channel subunit family;glutamate receptor 2.1 | transcript=eq;prot=eq; | - | 5 | No |