Sub-family  

Parent family
HOM000083
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (9 genes)
bdi
Brachypodium distachyon (10 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (22 genes)
lja
Lotus japonicus (14 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (12 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (41 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (14 genes)
osaindica
Oryza sativa ssp. indica (16 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (9 genes)
ptr
Populus trichocarpa (14 genes)
rco
Ricinus communis (7 genes)
sbi
Sorghum bicolor (16 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (8 genes)
vca
Volvox carteri (4 genes)
vvi
Vitis vinifera (3 genes)
zma
Zea mays (13 genes)



The gene family ORTHO000015 has 246 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 13, showing 20 records out of 246 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G08700 aly name=fgenesh1_pm.C_scaffold_1000734;pid=311954;prot=eq;tid=311954 - scaffold_1 No
AL1G16930 aly name=fgenesh2_kg.1__1758__AT1G16030.1;pid=471804;prot=eq;tid=471804 - scaffold_1 No
AL1G52640 aly name=fgenesh1_pm.C_scaffold_1003691;pid=314911;prot=eq;tid=314911 + scaffold_1 No
AL2G00260 aly name=scaffold_200029.1;pid=892955;prot=eq;tid=924468 - scaffold_2 No
AL3G09640 aly name=scaffold_301074.1;pid=897104;prot=eq;tid=928617 - scaffold_3 No
AL3G13010 aly name=scaffold_301435.1;pid=897465;prot=eq;tid=928978 - scaffold_3 No
AL6G01640 aly name=Al_scaffold_0006_155;pid=860646;prot=eq;tid=892159 - scaffold_6 No
AL6G01650 aly name=fgenesh2_kg.6__163__AT5G02500.1;pid=487029;prot=eq;tid=487029 - scaffold_6 No
AL7G35520 aly name=fgenesh2_kg.7__3214__AT5G42020.1;pid=493781;prot=eq;tid=493781 + scaffold_7 No
AT1G09080 ath BIP3; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat, pollen tube growth; LOCATED IN: endoplasmic reticulum lumen; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT5G28540.1); Has 36561 Blast hits to 35981 proteins in 4871 species: Archae - 169; Bacteria - 17528; Metazoa - 4151; Fungi - 1824; Plants - 1283; Viruses - 337; Other Eukaryotes - 11269 (source: NCBI BLink).;Heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; - 1 No
AT1G16030 ath heat shock protein 70B (Hsp70b); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: cytosol, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 33913 Blast hits to 33562 proteins in 4835 species: Archae - 164; Bacteria - 16454; Metazoa - 3784; Fungi - 1785; Plants - 1262; Viruses - 309; Other Eukaryotes - 10155 (source: NCBI BLink).;heat shock protein 70B transcript=eq;prot=eq; - 1 No
AT1G56410 ath encodes a heat shock protein whose gene expression is induced by heat and dehydration.;heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; + 1 No
AT3G09440 ath Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to karrikin, response to heat; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34172 Blast hits to 33801 proteins in 4833 species: Archae - 161; Bacteria - 16465; Metazoa - 3857; Fungi - 1750; Plants - 1254; Viruses - 309; Other Eukaryotes - 10376 (source: NCBI BLink).;Heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; - 3 No
AT3G12580 ath heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).;heat shock protein 70 transcript=eq;prot=eq; - 3 No
AT5G02490 ath Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat, response to bacterium; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34231 Blast hits to 33880 proteins in 4856 species: Archae - 163; Bacteria - 16495; Metazoa - 3845; Fungi - 1761; Plants - 1263; Viruses - 309; Other Eukaryotes - 10395 (source: NCBI BLink).;Heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; - 5 No
AT5G02500 ath encodes a member of heat shock protein 70 family.;heat shock cognate protein 70-1 transcript=eq;prot=eq; - 5 No
AT5G28540 ath Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.;heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; - 5 No
AT5G42020 ath Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.;Heat shock protein 70 (Hsp 70) family protein transcript=eq;prot=eq; - 5 No
BD1G03720 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g03720.1;tid=Bradi1g03720.1;GeneName=Bradi1g03720;transcript=eq;prot=eq - Bd1 No
BD1G66470 bdi ATPase activity, coupled (Blast2GO) pid=Bradi1g66470.1;tid=Bradi1g66470.1;GeneName=Bradi1g66470;transcript=eq;prot=eq + Bd1 No
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