Sub-family  

Parent family
HOM000009
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (5 genes)
gma
Glycine max (58 genes)
lja
Lotus japonicus (7 genes)
mdo
Malus domestica (34 genes)
mes
Manihot esculenta (5 genes)
mtr
Medicago truncatula (94 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (22 genes)
rco
Ricinus communis (3 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (12 genes)
vvi
Vitis vinifera (9 genes)



The gene family ORTHO000012 has 254 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 13, showing 20 records out of 254 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G15350 aly name=fgenesh2_kg.3__1572__AT3G14470.1;pid=478871;prot=eq;tid=478871 + scaffold_3 No
AT3G14470 ath NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).;NB-ARC domain-containing disease resistance protein transcript=eq;prot=eq; + 3 No
BD2G52840 bdi NBS LRR pid=Bradi2g52840.1;tid=Bradi2g52840.1;GeneName=Bradi2g52840;transcript=eq;prot=eq - Bd2 No
CP00010G01860 cpa name=evm.TU.supercontig_10.186;pid=evm.TU.supercontig_10.186;prot=eq;transcript=eq - supercontig_10 No
CP00010G01910 cpa name=evm.TU.supercontig_10.191;pid=evm.TU.supercontig_10.191;prot=eq;transcript=eq - supercontig_10 No
CP00010G01920 cpa name=evm.TU.supercontig_10.192;pid=evm.TU.supercontig_10.192;prot=eq;transcript=eq - supercontig_10 No
CP00010G01940 cpa name=evm.TU.supercontig_10.194;pid=evm.TU.supercontig_10.194;prot=eq;transcript=eq - supercontig_10 No
CP00077G00940 cpa name=evm.TU.supercontig_77.94;pid=evm.TU.supercontig_77.94;prot=eq;transcript=eq + supercontig_77 No
GM00G01010 gma 1667 pid=16300940;transcript=eq;prot=eq;name=Glyma1667s00200.1 + scaffold_1667 No
GM01G31860 gma 01 pid=16244909;transcript=eq;prot=eq;name=Glyma01g31860.1 - Gm01 No
GM03G04030 gma 03 pid=16251056;transcript=eq;prot=eq;name=Glyma03g04030.1 - Gm03 No
GM03G04080 gma 03 pid=16251061;transcript=eq;prot=eq;name=Glyma03g04080.1 - Gm03 No
GM03G04100 gma 03 pid=16251063;transcript=eq;prot=eq;name=Glyma03g04100.1 - Gm03 No
GM03G04140 gma 03 pid=16251067;transcript=eq;prot=eq;name=Glyma03g04140.1 - Gm03 No
GM03G04180 gma 03 pid=16251071;transcript=eq;prot=eq;name=Glyma03g04180.1 - Gm03 No
GM03G04200 gma 03 pid=16251073;transcript=eq;prot=eq;name=Glyma03g04200.1 - Gm03 No
GM03G04260 gma 03 pid=16251077;transcript=eq;prot=eq;name=Glyma03g04260.1 - Gm03 No
GM03G04300 gma 03 pid=16251081;transcript=eq;prot=eq;name=Glyma03g04300.1 - Gm03 No
GM03G04530 gma 03 pid=16251104;transcript=eq;prot=eq;name=Glyma03g04530.1 + Gm03 No
GM03G04560 gma 03 pid=16251108;transcript=eq;prot=eq;name=Glyma03g04560.1 + Gm03 No
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