Sub-family  

Parent family
HOM000145
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (16 genes)
ath
Arabidopsis thaliana (16 genes)
bdi
Brachypodium distachyon (13 genes)
cpa
Carica papaya (17 genes)
fve
Fragaria vesca (16 genes)
gma
Glycine max (41 genes)
lja
Lotus japonicus (10 genes)
mdo
Malus domestica (24 genes)
mes
Manihot esculenta (27 genes)
mtr
Medicago truncatula (21 genes)
osa
Oryza sativa ssp. japonica (14 genes)
osaindica
Oryza sativa ssp. indica (14 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (20 genes)
rco
Ricinus communis (16 genes)
sbi
Sorghum bicolor (11 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (14 genes)
vvi
Vitis vinifera (13 genes)
zma
Zea mays (15 genes)



The gene family ORTHO000009 has 324 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 17, showing 20 records out of 324 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G08110 aly name=fgenesh1_pm.C_scaffold_383000001;pid=333310;prot=eq;tid=333310 + scaffold_383 No
AL1G32920 aly name=fgenesh1_pm.C_scaffold_1002534;pid=313754;prot=eq;tid=313754 - scaffold_1 No
AL1G39800 aly name=fgenesh2_kg.1__3790__AT1G45130.1;pid=473836;prot=eq;tid=473836 + scaffold_1 No
AL2G26380 aly name=fgenesh2_kg.2__2036__AT1G77410.1;pid=476906;prot=eq;tid=476906 - scaffold_2 No
AL3G14350 aly name=scaffold_301587.1;pid=897617;prot=eq;tid=929130 + scaffold_3 No
AL3G37320 aly name=fgenesh2_kg.3__3257__AT2G16730.1;pid=480556;prot=eq;tid=480556 - scaffold_3 No
AL4G11510 aly name=fgenesh2_kg.4__716__AT2G28470.1;pid=481656;prot=eq;tid=481656 + scaffold_4 No
AL4G17970 aly name=scaffold_401847.1;pid=902346;prot=eq;tid=933859 - scaffold_4 No
AL5G22760 aly name=fgenesh2_kg.5__1647__AT3G52840.1;pid=485655;prot=eq;tid=485655 + scaffold_5 No
AL6G21040 aly name=fgenesh1_pg.C_scaffold_6001760;pid=351167;prot=eq;tid=351167 + scaffold_6 No
AL7G04450 aly name=fgenesh2_kg.7__433__AT4G36360.1;pid=491000;prot=eq;tid=491000 + scaffold_7 No
AL7G05950 aly name=fgenesh2_kg.7__589__AT4G35010.1;pid=491156;prot=eq;tid=491156 + scaffold_7 No
AL7G15910 aly name=fgenesh2_kg.7__1631__AT4G26140.1;pid=492198;prot=eq;tid=492198 + scaffold_7 No
AL8G22480 aly name=Al_scaffold_0008_2132;pid=885868;prot=eq;tid=917381 + scaffold_8 No
AL8G30410 aly name=fgenesh2_kg.8__2384__AT5G63800.1;pid=496568;prot=eq;tid=496568 + scaffold_8 No
AL8G30420 aly name=scaffold_803077.1;pid=919677;prot=eq;tid=951190 + scaffold_8 No
AT1G31740 ath Encodes a putative β-galactosidase.;beta-galactosidase 15 transcript=eq;prot=eq; - 1 No
AT1G45130 ath beta-galactosidase 5 (BGAL5); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.1); Has 2206 Blast hits to 2062 proteins in 469 species: Archae - 15; Bacteria - 946; Metazoa - 364; Fungi - 218; Plants - 593; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).;beta-galactosidase 5 transcript=eq;prot=eq; + 1 No
AT1G77410 ath beta-galactosidase 16 (BGAL16); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 35 protein (TAIR:AT5G63800.1); Has 2516 Blast hits to 2225 proteins in 479 species: Archae - 17; Bacteria - 1086; Metazoa - 478; Fungi - 225; Plants - 619; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).;beta-galactosidase 16 transcript=eq;prot=eq; - 1 No
AT2G16730 ath putative beta-galactosidase (BGAL13 gene);glycosyl hydrolase family 35 protein transcript=eq;prot=eq; - 2 No
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