Sub-family  

Parent family
HOM000002
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (14 genes)
ath
Arabidopsis thaliana (5 genes)
bdi
Brachypodium distachyon (18 genes)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (5 genes)
gma
Glycine max (12 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (54 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (29 genes)
osa
Oryza sativa ssp. japonica (37 genes)
osaindica
Oryza sativa ssp. indica (42 genes)
ptr
Populus trichocarpa (25 genes)
rco
Ricinus communis (9 genes)
sbi
Sorghum bicolor (33 genes)
tca
Theobroma cacao (16 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (18 genes)



The gene family ORTHO000008 has 327 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 17, showing 20 records out of 327 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G34520 aly name=Al_scaffold_0003_3359;pid=874718;prot=eq;tid=906231 + scaffold_3 No
AL4G11160 aly name=scaffold_401127.1;pid=901626;prot=eq;tid=933139 - scaffold_4 No
AL5G12790 aly name=Al_scaffold_0005_1224;pid=865745;prot=eq;tid=897258 - scaffold_5 No
AL5G15840 aly name=scaffold_501643.1;pid=905939;prot=eq;tid=937452 - scaffold_5 No
AL5G15850 aly name=scaffold_501644.1;pid=905940;prot=eq;tid=937453 - scaffold_5 No
AL5G15860 aly name=fgenesh1_pg.C_scaffold_5001207;pid=347815;prot=eq;tid=347815 - scaffold_5 No
AL5G15870 aly name=fgenesh1_pg.C_scaffold_5001208;pid=347816;prot=eq;tid=347816 - scaffold_5 No
AL5G15880 aly name=fgenesh1_pg.C_scaffold_5001209;pid=347817;prot=eq;tid=347817 - scaffold_5 No
AL5G16310 aly name=fgenesh1_pg.C_scaffold_5001243;pid=347851;prot=eq;tid=347851 + scaffold_5 No
AL5G16320 aly name=scaffold_501690.1;pid=905986;prot=eq;tid=937499 + scaffold_5 No
AL5G16350 aly name=scaffold_501693.1;pid=905989;prot=eq;tid=937502 + scaffold_5 No
AL5G16360 aly name=fgenesh1_pm.C_scaffold_5000914;pid=323370;prot=eq;tid=323370 + scaffold_5 No
AL6G20760 aly name=fgenesh2_kg.6__2087__AT5G20480.1;pid=488953;prot=eq;tid=488953 + scaffold_6 No
AL8G14330 aly name=scaffold_801444.1;pid=918044;prot=eq;tid=949557 + scaffold_8 No
AT3G47090 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 3 No
AT3G47110 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; - 3 No
AT3G47570 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; + 3 No
AT3G47580 ath Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 205192 Blast hits to 128567 proteins in 4736 species: Archae - 173; Bacteria - 19530; Metazoa - 65101; Fungi - 9747; Plants - 86373; Viruses - 300; Other Eukaryotes - 23968 (source: NCBI BLink).;Leucine-rich repeat protein kinase family protein transcript=eq;prot=eq; + 3 No
AT5G20480 ath Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.;EF-TU receptor transcript=eq;prot=eq; + 5 No
BD1G29792 bdi pid=Bradi1g29792.1;tid=Bradi1g29792.1;GeneName=Bradi1g29792;transcript=eq;prot=eq - Bd1 No
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