Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
gma
Glycine max (1 gene)
mtr
Medicago truncatula (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM007826 has 12 genes in 12 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 1, showing 12 records out of 12 total, starting on record 1, ending on 12

gene_id species description comment strand chr outlier
AL1G00060 aly name=fgenesh2_kg.1__5__AT1G02160.2;pid=470051;prot=eq;tid=470051 - scaffold_1 No
AT1G02160 ath Cox19 family protein (CHCH motif); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MTCP1 (InterPro:IPR009069), CHCH (InterPro:IPR010625); Has 36 Blast hits to 36 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 19; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Cox19 family protein (CHCH motif) transcript=eq;prot=eq; + 1 No
BD5G25277 bdi pid=Bradi5g25277.1;tid=Bradi5g25277.1;GeneName=Bradi5g25277;transcript=eq;prot=eq + Bd5 No
GM08G45440 gma 08 pid=16273922;transcript=eq;prot=eq;name=Glyma08g45440.1 + Gm08 No
MT7G050540 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g050540.1; - 7 No
OSINDICA_04G49050 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC019137; + Chr04 No
PP00162G00290 ppa NULL name=e_gw1.162.81.1,pid=140043,prot=eq,tid=140043 + scaffold_162 No
PT14G04890 ptr PACid=17323647;name=POPTR_0014s05080;alias=pt036942m; transcript=eq;prot=eq;protein_id=17323647; + scaffold_14 No
RC29709G00200 rco name=29709.m001185;gene=29709.t000021;note=29709.t000021;transcript=eq;prot=eq + 29709 No
TC01G039790 tca RNAname=Tc01_t039790;GeneName=Tc01_g039790;transcript=eq;prot=eq + Tc01 No
VV15G01460 vvi name=GSVIVG01018320001; transcript=eq;prot=eq;name=GSVIVG01018320001;pid=GSVIVG01018320001;tid=GSVIVT01018320001; - chr15 No
ZM02G01340 zma name=GRMZM2G119916;tid=GRMZM2G119916_T01;pid=GRMZM2G119916_P01;transcript=eq;prot=eq; - 2 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier