Gene family  

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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mes
Manihot esculenta (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)



The gene family HOM007686 has 12 genes in 10 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 12 records out of 12 total, starting on record 1, ending on 12

gene_id species description comment strand chr outlier
AL7G22460 aly name=fgenesh2_kg.7__2310__AT4G19980.1;pid=492877;prot=eq;tid=492877 + scaffold_7 No
AT4G19980 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; - 4 No
CP00030G01220 cpa name=evm.TU.supercontig_30.122;pid=evm.TU.supercontig_30.122;prot=eq;transcript=eq + supercontig_30 Yes
FV3G11060 fve Probable calcium-binding protein CML22 (similar to) transcript=eq;prot=eq;pid=gene20000 - LG3 No
GM05G26200 gma 05 pid=16259687;transcript=eq;prot=eq;name=Glyma05g26200.1 - Gm05 No
GM08G09130 gma 08 pid=16270497;transcript=eq;prot=eq;name=Glyma08g09130.1 - Gm08 No
LJ4G002890 lja prot=eq;transcript=eq;scaffold=CM0007;name=chr4.CM0007.370.nc + chr4 No
ME03342G00030 mes PACid=17976795;RNAname=cassava4.1_033007m;GeneName=cassava4.1_033007m.g;transcript=eq;prot=eq + scaffold03342 No
PT01G00350 ptr PACid=17320178;name=POPTR_0001s00540;alias=pt040737m,fgenesh4_pg.C_scaffold_127000075; transcript=eq;prot=eq;protein_id=17320178; + scaffold_1 No
PT03G10010 ptr PACid=17308096;name=POPTR_0003s10960;alias=pt024296m,fgenesh4_pg.C_LG_III000883; transcript=eq;prot=eq;protein_id=17308096; - scaffold_3 No
RC29840G00230 rco name=29840.m000627;gene=29840.t000025;note=29840.t000025;transcript=eq;prot=eq - 29840 No
TC02G000570 tca RNAname=Tc02_t000570;GeneName=Tc02_g000570;transcript=eq;prot=eq + Tc02 No
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