Gene family  

Sub-families
ORTHO031747 (3 genes in 3 species)
ORTHO044982 (2 genes in 2 species)
ORTHO046872 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (3 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
zma
Zea mays (2 genes)



The gene family HOM007176 has 16 genes in 9 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL6G09180 aly name=fgenesh2_kg.6__903__AT5G09520.1;pid=487769;prot=eq;tid=487769 - scaffold_6 No
AL6G09190 aly name=fgenesh2_kg.6__904__AT5G09530.1;pid=487770;prot=eq;tid=487770 - scaffold_6 No
AT5G09520 ath hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09530.1); Has 4837 Blast hits to 2182 proteins in 495 species: Archae - 22; Bacteria - 2025; Metazoa - 1314; Fungi - 166; Plants - 730; Viruses - 63; Other Eukaryotes - 517 (source: NCBI BLink).;hydroxyproline-rich glycoprotein family protein transcript=eq;prot=eq; - 5 No
AT5G09530 ath hydroxyproline-rich glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09520.1); Has 56710 Blast hits to 18930 proteins in 1860 species: Archae - 251; Bacteria - 17598; Metazoa - 17723; Fungi - 4561; Plants - 6151; Viruses - 953; Other Eukaryotes - 9473 (source: NCBI BLink).;hydroxyproline-rich glycoprotein family protein transcript=eq;prot=eq; - 5 No
BD1G22440 bdi pid=Bradi1g22440.1;tid=Bradi1g22440.1;GeneName=Bradi1g22440;transcript=eq;prot=eq + Bd1 No
BD1G22450 bdi protein serine/threonine kinase activity (Blast2GO) pid=Bradi1g22450.1;tid=Bradi1g22450.1;GeneName=Bradi1g22450;transcript=eq;prot=eq + Bd1 No
BD1G22470 bdi nuclear hormone receptor binding (Blast2GO) pid=Bradi1g22470.1;tid=Bradi1g22470.1;GeneName=Bradi1g22470;transcript=eq;prot=eq + Bd1 No
GM00G00125 gma 41 pid=16242692;transcript=eq;prot=eq;name=Glyma0041s00240.1 + scaffold_41 No
GM14G10200 gma 14 pid=16295034;transcript=eq;prot=eq;name=Glyma14g10200.1 + Gm14 No
LJ2G012830 lja prot=eq;transcript=eq;scaffold=CM0903;name=chr2.CM0903.360.nd - chr2 No
OSINDICA_07G33180 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC042595; - Chr07 No
OSINDICA_07G33190 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC042596; - Chr07 No
SB02G038470 sbi 2 prot=eq;pid=5051978;tid=5051978 - chr_2 No
TC02G010730 tca RNAname=Tc02_t010730;GeneName=Tc02_g010730;transcript=eq;prot=eq + Tc02 No
ZM02G38380 zma hypothetical protein LOC100383538 name=GRMZM2G152189;tid=GRMZM2G152189_T01;pid=GRMZM2G152189_P01;transcript=eq;prot=eq; - 2 No
ZM07G26400 zma hypothetical protein LOC100194091 name=GRMZM2G019373;tid=GRMZM2G019373_T01;pid=GRMZM2G019373_P01;transcript=eq;prot=eq; - 7 No
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