Gene family  

Sub-families
ORTHO018914 (6 genes in 2 species)
ORTHO031837 (3 genes in 3 species)
ORTHO045736 (2 genes in 2 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (5 genes)
cpa
Carica papaya (6 genes)



The gene family HOM007075 has 16 genes in 3 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 16 records out of 16 total, starting on record 1, ending on 16

gene_id species description comment strand chr outlier
AL7G14820 aly name=Al_scaffold_0007_1421;pid=857922;prot=eq;tid=889435 - scaffold_7 No
AL7G14830 aly name=fgenesh2_kg.7__1512__AT4G27160.1;pid=492079;prot=eq;tid=492079 - scaffold_7 No
AL7G14840 aly name=scaffold_701572.1;pid=913830;prot=eq;tid=945343 - scaffold_7 No
AL7G14850 aly name=fgenesh2_kg.7__1514__AT4G27140.1;pid=492081;prot=eq;tid=492081 - scaffold_7 No
AL8G20030 aly name=fgenesh2_kg.8__1368__AT5G54740.1;pid=495552;prot=eq;tid=495552 - scaffold_8 No
AT4G27140 ath seed storage albumin 1 (SESA1); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, leaf apex, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 4 (TAIR:AT4G27170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;seed storage albumin 1 transcript=eq;prot=eq; + 4 No
AT4G27150 ath seed storage albumin 2 (SESA2); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;seed storage albumin 2 transcript=eq;prot=eq; + 4 No
AT4G27160 ath seed storage albumin 3 (SESA3); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 2 (TAIR:AT4G27150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;seed storage albumin 3 transcript=eq;prot=eq; + 4 No
AT4G27170 ath seed storage albumin 4 (SESA4); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;seed storage albumin 4 transcript=eq;prot=eq; + 4 No
AT5G54740 ath seed storage albumin 5 (SESA5); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;seed storage albumin 5 transcript=eq;prot=eq; - 5 No
CP00010G02170 cpa name=evm.TU.supercontig_10.217;pid=evm.TU.supercontig_10.217;prot=eq;transcript=eq + supercontig_10 No
CP00010G02210 cpa name=evm.TU.supercontig_10.221;pid=evm.TU.supercontig_10.221;prot=eq;transcript=eq - supercontig_10 No
CP00010G02220 cpa name=evm.TU.supercontig_10.222;pid=evm.TU.supercontig_10.222;prot=eq;transcript=eq - supercontig_10 No
CP00010G02270 cpa name=evm.TU.supercontig_10.227;pid=evm.TU.supercontig_10.227;prot=eq;transcript=eq - supercontig_10 No
CP00010G02290 cpa name=evm.TU.supercontig_10.229;pid=evm.TU.supercontig_10.229;prot=eq;transcript=eq - supercontig_10 No
CP00097G00550 cpa name=evm.TU.supercontig_97.55;pid=evm.TU.supercontig_97.55;prot=eq;transcript=eq + supercontig_97 No
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