Gene family  

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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)



The gene family HOM007051 has 17 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 1, showing 17 records out of 17 total, starting on record 1, ending on 17

gene_id species description comment strand chr outlier
AL8G25670 aly name=fgenesh2_kg.8__1899__AT5G59500.1;pid=496083;prot=eq;tid=496083 + scaffold_8 No
AT5G59500 ath protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases; FUNCTIONS IN: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity; INVOLVED IN: C-terminal protein amino acid methylation; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isoprenylcysteine carboxyl methyltransferase (InterPro:IPR007269); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases transcript=eq;prot=eq; + 5 No
CP00081G01220 cpa name=evm.TU.supercontig_81.122;pid=evm.TU.supercontig_81.122;prot=eq;transcript=eq - supercontig_81 No
FV3G29080 fve Protein-S-isoprenylcysteine O-methyltransferase (pcCMT) (probable) transcript=eq;prot=eq;pid=gene30190 + LG3 No
GM08G24410 gma 08 pid=16272333;transcript=eq;prot=eq;name=Glyma08g24410.1 + Gm08 No
GM15G34780 gma 15 pid=16300105;transcript=eq;prot=eq;name=Glyma15g34780.1 - Gm15 No
LJ0G363970 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_130666;name=LjSGA_130666.1 + LjSGA_130666 No
MD03G006460 mdo transcript=eq;prot=eq;pid=MDP0000194587;tid=MDP0000194587;contig=MDC010058.303 - 3 No
ME07991G00760 mes PACid=17967794;RNAname=cassava4.1_008749m;GeneName=cassava4.1_008749m.g;transcript=eq;prot=eq + scaffold07991 No
MT8G044030 mtr Genomic DNA chromosome 5 BAC clone F2O15 (AHRD V1 **** Q9LTI0_ARATH) transcript=eq;prot=eq;pid=Medtr8g044030.1; + 8 No
PP00111G00500 ppa NULL name=estExt_gwp_gw1.C_1110060,pid=187807,prot=eq,tid=187807 - scaffold_111 No
PT01G24160 ptr PACid=17330817;name=POPTR_0001s24920;alias=pt038772m; transcript=eq;prot=eq;protein_id=17330817; + scaffold_1 No
PT09G03700 ptr PACid=17315934;name=POPTR_0009s03890;alias=pt004639m,grail3.0001115101; transcript=eq;prot=eq;protein_id=17315934; + scaffold_9 No
RC28879G00010 rco name=28879.m000028;gene=28879.t000001;note=28879.t000001;transcript=eq;prot=eq + 28879 No
SM00004G03360 smo proteinId=67758;transcriptId=67758;name=gw1.4.1496.1;transcript=eq;prot=eq - scaffold_4 No
TC09G031410 tca RNAname=Tc09_t031410;GeneName=Tc09_g031410;transcript=eq;prot=eq - Tc09 No
VV06G03280 vvi name=GSVIVG01024926001; transcript=eq;prot=eq;name=GSVIVG01024926001;pid=GSVIVG01024926001;tid=GSVIVT01024926001; + chr6 No
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