Gene family 
- Id
- HOM006710
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
- No subfamilies present
- Keywords
-
Overview of gene family content
The gene family HOM006710 has 19 genes in 3 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : HOM006710
Page 1 of 1, showing 19 records out of 19 total, starting on record 1, ending on 19
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| CP00002G00100 | cpa | name=evm.TU.supercontig_2.10;pid=evm.TU.supercontig_2.10;prot=eq;transcript=eq | + | supercontig_2 | No | |
| CP00004G01340 | cpa | name=evm.TU.supercontig_4.134;pid=evm.TU.supercontig_4.134;prot=eq;transcript=eq | + | supercontig_4 | No | |
| CP00007G00290 | cpa | name=evm.TU.supercontig_7.29;pid=evm.TU.supercontig_7.29;prot=eq;transcript=eq | - | supercontig_7 | No | |
| CP00014G02140 | cpa | name=evm.TU.supercontig_14.214;pid=evm.TU.supercontig_14.214;prot=eq;transcript=eq | - | supercontig_14 | No | |
| CP00030G01190 | cpa | name=evm.TU.supercontig_30.119;pid=evm.TU.supercontig_30.119;prot=eq;transcript=eq | - | supercontig_30 | No | |
| CP00046G01370 | cpa | name=evm.TU.supercontig_46.137;pid=evm.TU.supercontig_46.137;prot=eq;transcript=eq | + | supercontig_46 | No | |
| CP00078G00510 | cpa | name=evm.TU.supercontig_78.51;pid=evm.TU.supercontig_78.51;prot=eq;transcript=eq | - | supercontig_78 | No | |
| CP00106G00040 | cpa | name=evm.TU.supercontig_106.4;pid=evm.TU.supercontig_106.4;prot=eq;transcript=eq | - | supercontig_106 | No | |
| CP00131G00020 | cpa | name=evm.TU.supercontig_131.2;pid=evm.TU.supercontig_131.2;prot=eq;transcript=eq | - | supercontig_131 | No | |
| CP00137G00020 | cpa | name=evm.TU.supercontig_137.2;pid=evm.TU.supercontig_137.2;prot=eq;transcript=eq | + | supercontig_137 | No | |
| CP00167G00020 | cpa | name=evm.TU.supercontig_167.2;pid=evm.TU.supercontig_167.2;prot=eq;transcript=eq | + | supercontig_167 | No | |
| CP00211G00240 | cpa | name=evm.TU.supercontig_211.24;pid=evm.TU.supercontig_211.24;prot=eq;transcript=eq | + | supercontig_211 | No | |
| CP00249G00020 | cpa | name=evm.TU.supercontig_249.2;pid=evm.TU.supercontig_249.2;prot=eq;transcript=eq | + | supercontig_249 | No | |
| CP00257G00020 | cpa | name=evm.TU.supercontig_257.2;pid=evm.TU.supercontig_257.2;prot=eq;transcript=eq | + | supercontig_257 | No | |
| CP00599G00030 | cpa | name=evm.TU.supercontig_599.3;pid=evm.TU.supercontig_599.3;prot=eq;transcript=eq | + | supercontig_599 | No | |
| CP32211G00010 | cpa | name=evm.TU.contig_32211.1;pid=evm.TU.contig_32211.1;prot=eq;transcript=eq | + | contig_32211 | No | |
| CP36511G00010 | cpa | name=evm.TU.contig_36511.1;pid=evm.TU.contig_36511.1;prot=eq;transcript=eq | - | contig_36511 | No | |
| ME00858G00010 | mes | PACid=17980216;RNAname=cassava4.1_031265m;GeneName=cassava4.1_031265m.g;transcript=eq;prot=eq | - | scaffold00858 | No | |
| RC29705G00210 | rco | name=29705.m000589;gene=29705.t000021;note=29705.t000021;transcript=eq;prot=eq | - | 29705 | No |
<< previous
next >>