Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM006478 has 21 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G23500 aly name=scaffold_302555.1;pid=898585;prot=eq;tid=930098 - scaffold_3 No
AT3G21400 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; - 3 No
BD4G05590 bdi pid=Bradi4g05590.1;tid=Bradi4g05590.1;GeneName=Bradi4g05590;transcript=eq;prot=eq - Bd4 No
CP00016G01640 cpa name=evm.TU.supercontig_16.164;pid=evm.TU.supercontig_16.164;prot=eq;transcript=eq + supercontig_16 No
FV4G12690 fve Formin-like protein 7 (probable) transcript=eq;prot=eq;pid=gene06869 + LG4 No
GM09G05120 gma 09 pid=16274837;transcript=eq;prot=eq;name=Glyma09g05120.1 - Gm09 No
GM15G16380 gma 15 pid=16298976;transcript=eq;prot=eq;name=Glyma15g16380.1 - Gm15 No
MD00G385360 mdo transcript=eq;prot=eq;pid=MDP0000300652;tid=MDP0000300652;contig=MDC017430.257 + MDC017430.257 No
MD16G012470 mdo transcript=eq;prot=eq;pid=MDP0000185841;tid=MDP0000185841;contig=MDC009837.265 - 16 No
ME01551G03490 mes PACid=17962269;RNAname=cassava4.1_017000m;GeneName=cassava4.1_017000m.g;transcript=eq;prot=eq + scaffold01551 No
ME09365G00440 mes PACid=17971479;RNAname=cassava4.1_016293m;GeneName=cassava4.1_016293m.g;transcript=eq;prot=eq + scaffold09365 No
OS12G35550 osa expressed protein transcript=eq;prot=eq; + 12 No
OSINDICA_12G23820 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC033330; + Chr12 No
PP00171G00580 ppa NULL name=e_gw1.171.60.1,pid=140834,prot=eq,tid=140834 - scaffold_171 No
PT00G16870 ptr PACid=17330309;name=POPTR_0034s00210;alias=pt031943m,estExt_Genewise1_v1.C_1320075; transcript=eq;prot=eq;protein_id=17330309; + scaffold_34 No
PT10G02090 ptr PACid=17324376;name=POPTR_0010s02470;alias=pt013563m; transcript=eq;prot=eq;protein_id=17324376; + scaffold_10 No
RC29726G01350 rco name=29726.m004025;gene=29726.t000137;note=29726.t000137;transcript=eq;prot=eq + 29726 No
SB08G017200 sbi 8 prot=eq;pid=5045172;tid=5045172 + chr_8 No
TC04G027930 tca RNAname=Tc04_t027930;GeneName=Tc04_g027930;transcript=eq;prot=eq + Tc04 No
VV05G03000 vvi name=GSVIVG01017744001; transcript=eq;prot=eq;name=GSVIVG01017744001;pid=GSVIVG01017744001;tid=GSVIVT01017744001; + chr5 No
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