Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM006447 has 21 genes in 18 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 21 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G14140 aly name=fgenesh2_kg.5__962__AT3G45900.1;pid=484970;prot=eq;tid=484970 - scaffold_5 No
AT3G45900 ath Ribonuclease P protein subunit P38-related; BEST Arabidopsis thaliana protein match is: Ribonuclease P protein subunit P38-related (TAIR:AT5G53020.1); Has 1049 Blast hits to 987 proteins in 199 species: Archae - 26; Bacteria - 115; Metazoa - 530; Fungi - 58; Plants - 90; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).;Ribonuclease P protein subunit P38-related transcript=eq;prot=eq; - 3 No
BD1G01220 bdi pid=Bradi1g01220.1;tid=Bradi1g01220.1;GeneName=Bradi1g01220;transcript=eq;prot=eq - Bd1 No
CP37635G00010 cpa name=evm.TU.contig_37635.1;pid=evm.TU.contig_37635.1;prot=eq;transcript=eq - contig_37635 No
FV5G29400 fve Coiled-coil domain-containing protein 157 (probable) transcript=eq;prot=eq;pid=gene24646 + LG5 No
GM04G14680 gma 04 pid=16255899;transcript=eq;prot=eq;name=Glyma04g14680.1 - Gm04 No
GM09G34790 gma 09 pid=16277204;transcript=eq;prot=eq;name=Glyma09g34790.1 - Gm09 No
LJ2G020740 lja prot=eq;transcript=eq;scaffold=CM0803;name=chr2.CM0803.260.nc - chr2 No
MD00G063570 mdo transcript=eq;prot=eq;pid=MDP0000134703;tid=MDP0000134703;contig=MDC002658.183 - MDC002658.183 No
MD06G001750 mdo transcript=eq;prot=eq;pid=MDP0000792375;tid=MDP0000792375;contig=MDC018716.335 - 6 No
ME05787G00030 mes PACid=17992123;RNAname=cassava4.1_008117m;GeneName=cassava4.1_008117m.g;transcript=ne;prot=eq - scaffold05787 No
MT5G026680 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr5g026680.1; + 5 No
OS03G63660 osa expressed protein transcript=eq;prot=eq; - 3 No
OSINDICA_03G60720 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009018; - Chr03 No
PT01G01030 ptr PACid=17325652;name=POPTR_0001s01220;alias=pt038625m; transcript=eq;prot=eq;protein_id=17325652; + scaffold_1 No
RC29827G00640 rco name=29827.m002592;gene=29827.t000065;note=29827.t000065;transcript=eq;prot=eq + 29827 No
RC41929G00010 rco name=41929.m000006;gene=41929.t000001;note=41929.t000001;transcript=eq;prot=eq - 41929 Yes
SB01G000830 sbi 1 prot=eq;pid=5027948;tid=5027948 + chr_1 No
TC03G031310 tca RNAname=Tc03_t031310;GeneName=Tc03_g031310;transcript=eq;prot=eq - Tc03 No
VV02G08990 vvi name=GSVIVG01022805001; transcript=eq;prot=eq;name=GSVIVG01022805001;pid=GSVIVG01022805001;tid=GSVIVT01022805001; + chr2 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier