Gene family 
- Id
- HOM006165
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
- No subfamilies present
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (2 genes)
- gma
- Glycine max (2 genes)
- lja
- Lotus japonicus (1 gene)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (2 genes)
- mtr
- Medicago truncatula (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ptr
- Populus trichocarpa (2 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vvi
- Vitis vinifera (2 genes)
- zma
- Zea mays (1 gene)
The gene family HOM006165 has 23 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM006165
Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL6G12810 | aly | name=scaffold_601319.1;pid=909262;prot=eq;tid=940775 | + | scaffold_6 | No | |
| AT5G13100 | ath | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | transcript=eq;prot=eq; | + | 5 | No |
| BD2G03670 | bdi | pid=Bradi2g03670.1;tid=Bradi2g03670.1;GeneName=Bradi2g03670;transcript=eq;prot=eq | + | Bd2 | No | |
| CP00099G00520 | cpa | name=evm.TU.supercontig_99.52;pid=evm.TU.supercontig_99.52;prot=eq;transcript=eq | + | supercontig_99 | No | |
| CP00099G00530 | cpa | name=evm.TU.supercontig_99.53;pid=evm.TU.supercontig_99.53;prot=eq;transcript=eq | + | supercontig_99 | No | |
| GM02G10730 | gma | 02 | pid=16247657;transcript=eq;prot=eq;name=Glyma02g10730.1 | - | Gm02 | No |
| GM18G52090 | gma | 18 | pid=16311201;transcript=eq;prot=eq;name=Glyma18g52090.1 | + | Gm18 | No |
| LJ0G454300 | lja | prot=eq;transcript=eq;scaffold=LjT38B21;name=LjT38B21.10.nc | + | chr0 | No | |
| MD16G007620 | mdo | transcript=eq;prot=eq;pid=MDP0000259323;tid=MDP0000259323;contig=MDC008250.260 | + | 16 | No | |
| ME03219G00420 | mes | PACid=17977935;RNAname=cassava4.1_010905m;GeneName=cassava4.1_010905m.g;transcript=eq;prot=eq | - | scaffold03219 | No | |
| ME06711G00590 | mes | PACid=17961563;RNAname=cassava4.1_010788m;GeneName=cassava4.1_010788m.g;transcript=eq;prot=eq | - | scaffold06711 | No | |
| MT7G022390 | mtr | Unknown Protein (AHRD V1) | transcript=eq;prot=eq;pid=Medtr7g022390.1; | + | 7 | No |
| OS01G01295 | osa | expressed protein | transcript=eq;prot=eq; | + | 1 | No |
| OSINDICA_01G00300 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC000019; | + | Chr01 | No |
| PT01G13340 | ptr | PACid=17306811;name=POPTR_0001s13530;alias=pt039165m,estExt_fgenesh4_pg.C_LG_I0524; | transcript=eq;prot=eq;protein_id=17306811; | - | scaffold_1 | No |
| PT03G15720 | ptr | PACid=17324443;name=POPTR_0003s16670;alias=pt023583m,eugene3.00031379; | transcript=eq;prot=eq;protein_id=17324443; | - | scaffold_3 | No |
| RC29929G01170 | rco | name=29929.m004616;gene=29929.t000119;note=29929.t000119;transcript=eq;prot=eq | - | 29929 | No | |
| SB03G009050 | sbi | 3 | prot=eq;pid=5052837;tid=5052837 | - | chr_3 | No |
| SM00000G06090 | smo | proteinId=71087;transcriptId=71087;name=gw1.0.2433.1;transcript=eq;prot=eq | - | scaffold_0 | No | |
| TC00G078050 | tca | RNAname=Tc00_t078050;GeneName=Tc00_g078050;transcript=eq;prot=eq | - | Tc00 | No |