Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (3 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM006149 has 23 genes in 16 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
BD3G01330 bdi pid=Bradi3g01330.1;tid=Bradi3g01330.1;GeneName=Bradi3g01330;transcript=eq;prot=eq - Bd3 No
CP01371G00010 cpa name=evm.TU.supercontig_1371.1;pid=evm.TU.supercontig_1371.1;prot=eq;transcript=eq - supercontig_1371 No
CP37388G00010 cpa name=evm.TU.contig_37388.1;pid=evm.TU.contig_37388.1;prot=eq;transcript=eq + contig_37388 No
FV0G27870 fve Protein encore (probable) transcript=eq;prot=eq;pid=gene16784 - scf0513168 No
GM10G31320 gma 10 pid=16280570;transcript=eq;prot=eq;name=Glyma10g31320.1 - Gm10 No
GM20G36190 gma 20 pid=16318039;transcript=eq;prot=eq;name=Glyma20g36190.1 + Gm20 No
MD00G117720 mdo transcript=eq;prot=eq;pid=MDP0000271818;tid=MDP0000271818;contig=MDC005026.185 + MDC005026.185 No
MD04G019630 mdo transcript=eq;prot=eq;pid=MDP0000288921;tid=MDP0000288921;contig=MDC011463.313 - 4 No
ME02264G00470 mes PACid=17993165;RNAname=cassava4.1_011899m;GeneName=cassava4.1_011899m.g;transcript=eq;prot=eq + scaffold02264 No
OS01G01050 osa R3H domain containing protein, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G00080 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000007; + Chr01 No
PP00533G00020 ppa NULL name=estExt_fgenesh1_pg.C_5330002,pid=173657,prot=eq,tid=173657 - scaffold_533 No
PT13G08350 ptr PACid=17307177;name=POPTR_0013s08540;alias=pt031480m,eugene3.00870065; transcript=eq;prot=eq;protein_id=17307177; + scaffold_13 No
PT13G08360 ptr PACid=17342280;name=POPTR_0013s08550;alias=pt031206m,fgenesh4_pg.C_scaffold_87000071; transcript=eq;prot=eq;protein_id=17342280; + scaffold_13 No
RC30128G04070 rco name=30128.m009021;gene=30128.t000482;note=30128.t000482;transcript=eq;prot=eq - 30128 No
SB01G035210 sbi 1 prot=eq;pid=5049410;tid=5049410 + chr_1 No
SM00057G00530 smo proteinId=422523;transcriptId=422523;name=fgenesh2_pg.C_scaffold_57000046;transcript=eq;prot=eq - scaffold_57 No
TC05G000370 tca RNAname=Tc05_t000370;GeneName=Tc05_g000370;transcript=eq;prot=eq + Tc05 No
TC05G000410 tca RNAname=Tc05_t000410;GeneName=Tc05_g000410;transcript=eq;prot=eq + Tc05 No
TC05G000430 tca RNAname=Tc05_t000430;GeneName=Tc05_g000430;transcript=eq;prot=eq + Tc05 No
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