Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (2 genes)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM006036 has 23 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 23 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G10900 aly name=fgenesh2_kg.3__1094__AT3G10572.1;pid=478393;prot=eq;tid=478393 + scaffold_3 No
AL3G33750 aly name=Al_scaffold_0003_3272;pid=874631;prot=eq;tid=906144 + scaffold_3 No
AT3G10572 ath 3-phosphoinositide-dependent protein kinase-1, putative; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;3-phosphoinositide-dependent protein kinase-1, putative transcript=eq;prot=eq; + 3 No
BD1G34360 bdi pid=Bradi1g34360.2;tid=Bradi1g34360.2;GeneName=Bradi1g34360;transcript=eq;prot=eq + Bd1 No
CP00115G00200 cpa name=evm.TU.supercontig_115.20;pid=evm.TU.supercontig_115.20;prot=eq;transcript=eq + supercontig_115 No
FV6G22340 fve LOB domain-containing protein 2 (AS2-like protein 32) (similar to) transcript=eq;prot=eq;pid=gene17794 + LG6 No
GM01G00470 gma 01 pid=16242913;transcript=eq;prot=eq;name=Glyma01g00470.1 + Gm01 No
GM07G15670 gma 07 pid=16267397;transcript=eq;prot=eq;name=Glyma07g15670.1 + Gm07 No
LJ0G217490 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_070391;name=LjSGA_070391.1 + LjSGA_070391 No
MD07G021140 mdo transcript=eq;prot=eq;pid=MDP0000250177;tid=MDP0000250177;contig=MDC010494.128 + 7 No
ME07991G00170 mes PACid=17967786;RNAname=cassava4.1_009966m;GeneName=cassava4.1_009982m.g;transcript=eq;prot=eq - scaffold07991 No
OS06G48970 osa expressed protein transcript=eq;prot=eq; + 6 No
OSINDICA_06G44870 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC012010; + Chr06 No
PP00199G00670 ppa NULL name=estExt_fgenesh1_pg.C_1990072,pid=169176,prot=eq,tid=169176 - scaffold_199 No
PT00G15810 ptr PACid=17344900;name=POPTR_0025s00690;alias=pt002490m,eugene3.00181106; transcript=eq;prot=eq;protein_id=17344900; - scaffold_25 No
PT06G07640 ptr PACid=17328284;name=POPTR_0006s07830;alias=pt018038m,eugene3.00060656; transcript=eq;prot=eq;protein_id=17328284; - scaffold_6 No
RC29868G00120 rco name=29868.m000348;gene=29868.t000012;note=29868.t000012;transcript=eq;prot=eq + 29868 No
SB10G029170 sbi 10 prot=eq;pid=5062216;tid=5062216 + chr_10 No
SM00000G04650 smo proteinId=437393;transcriptId=437393;name=estExt_fgenesh2_pg.C_00417;transcript=eq;prot=eq - scaffold_0 No
TC00G034840 tca RNAname=Tc00_t034840;GeneName=Tc00_g034840;transcript=eq;prot=eq - Tc00 No
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