Gene family  

Sub-families
ORTHO008772 (21 genes in 18 species)
ORTHO055248 (2 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM005955 has 24 genes in 18 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G16390 aly name=fgenesh2_kg.6__1642__AT5G16520.1;pid=488508;prot=eq;tid=488508 - scaffold_6 No
AT5G16520 ath unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; - 5 No
BD2G03770 bdi pid=Bradi2g03770.1;tid=Bradi2g03770.1;GeneName=Bradi2g03770;transcript=eq;prot=eq - Bd2 No
CP32193G00010 cpa name=evm.TU.contig_32193.1;pid=evm.TU.contig_32193.1;prot=eq;transcript=eq - contig_32193 No
FV0G27780 fve Protein crooked neck (probable) transcript=eq;prot=eq;pid=gene16781 + scf0513168 No
GM09G38770 gma 09 pid=16277677;transcript=eq;prot=eq;name=Glyma09g38770.1 - Gm09 No
GM18G47560 gma 18 pid=16310743;transcript=eq;prot=eq;name=Glyma18g47560.1 + Gm18 No
LJ0G229480 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_074958;name=LjSGA_074958.1 + LjSGA_074958 No
MD00G117730 mdo transcript=eq;prot=eq;pid=MDP0000167322;tid=MDP0000167322;contig=MDC005026.185 - MDC005026.185 No
MD04G019620 mdo transcript=eq;prot=eq;pid=MDP0000189965;tid=MDP0000189965;contig=MDC011463.313 + 4 No
MD12G025050 mdo transcript=eq;prot=eq;pid=MDP0000240888;tid=MDP0000240888;contig=MDC011463.322 + 12 No
ME02264G00480 mes PACid=17993160;RNAname=cassava4.1_015940m;GeneName=cassava4.1_015940m.g;transcript=eq;prot=eq - scaffold02264 No
ME02264G00490 mes PACid=17993265;RNAname=cassava4.1_008684m;GeneName=cassava4.1_008684m.g;transcript=eq;prot=eq - scaffold02264 No
MT7G079510 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr7g079510.1; + 7 No
OS01G01040 osa expressed protein transcript=eq;prot=eq; + 1 No
OSINDICA_01G00070 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000006; + Chr01 No
PT13G08370 ptr PACid=17322412;name=POPTR_0013s08560;alias=pt030452m,gw1.87.46.1; transcript=eq;prot=eq;protein_id=17322412; - scaffold_13 No
RC30128G04060 rco name=30128.m009020;gene=30128.t000481;note=30128.t000481;transcript=eq;prot=eq + 30128 No
SB01G035190 sbi 1 prot=eq;pid=5029938;tid=5029938 + chr_1 No
SB03G009220 sbi 3 prot=eq;pid=5052846;tid=5052846 - chr_3 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier