Gene family  

Sub-families
ORTHO009510 (20 genes in 17 species)
ORTHO034650 (3 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005894 has 24 genes in 17 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 24 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G17580 aly name=Al_scaffold_0006_1678;pid=862169;prot=eq;tid=893682 - scaffold_6 No
AT5G17690 ath Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state.;like heterochromatin protein (LHP1) transcript=eq;prot=eq; - 5 No
BD3G24710 bdi Homologous to Arabidopsis TERMINAL FLOWER 2 pid=Bradi3g24710.1;tid=Bradi3g24710.1;GeneName=Bradi3g24710;Name=BdTFL2;transcript=eq;prot=eq - Bd3 No
CP00073G00300 cpa name=evm.TU.supercontig_73.30;pid=evm.TU.supercontig_73.30;prot=eq;transcript=eq + supercontig_73 No
FV7G21740 fve Chromo domain-containing protein LHP1 (probable) transcript=eq;prot=eq;pid=gene03113 + LG7 No
GM03G23260 gma 03 pid=16252113;transcript=eq;prot=eq;name=Glyma03g23260.1 - Gm03 No
GM04G00340 gma 04 pid=16254328;transcript=eq;prot=eq;name=Glyma04g00340.1 + Gm04 No
GM06G00400 gma 06 pid=16261211;transcript=eq;prot=eq;name=Glyma06g00400.1 + Gm06 No
GM16G08860 gma 16 pid=16301944;transcript=eq;prot=eq;name=Glyma16g08860.1 + Gm16 No
MD00G116940 mdo transcript=eq;prot=eq;pid=MDP0000494323;tid=MDP0000494323;contig=MDC004995.186 - MDC004995.186 Yes
MD00G235900 mdo transcript=eq;prot=eq;pid=MDP0000240165;tid=MDP0000240165;contig=MDC010232.85 - MDC010232.85 No
MD17G021090 mdo transcript=eq;prot=eq;pid=MDP0000293596;tid=MDP0000293596;contig=MDC012942.205 + 17 No
ME03614G01610 mes PACid=17965593;RNAname=cassava4.1_007891m;GeneName=cassava4.1_007891m.g;transcript=ne;prot=eq + scaffold03614 No
ME11297G01050 mes PACid=17969261;RNAname=cassava4.1_008090m;GeneName=cassava4.1_008090m.g;transcript=ne;prot=eq + scaffold11297 No
MT0G11860 mtr Chromo domain-containing protein LHP1 (AHRD V1 *--- Q946J8); contains Interpro domain(s) IPR018125 Chromo shadow, subgroup transcript=eq;prot=eq;pid=AC225519_12.1; + AC225519.10 No
MT3G118260 mtr Chromo domain-containing protein LHP1 (AHRD V1 *--- Q946J8); contains Interpro domain(s) IPR018125 Chromo shadow, subgroup transcript=eq;prot=eq;pid=Medtr3g118260.1; - 3 No
OS10G17770 osa chromo domain%2Dcontaining protein LHP1, putative, expressed transcript=eq;prot=eq; + 10 No
OSINDICA_10G10710 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC030326; + Chr10 No
PT13G06570 ptr PACid=17316667;name=POPTR_0013s06760;alias=pt030678m; transcript=eq;prot=eq;protein_id=17316667; - scaffold_13 No
RC30148G00090 rco name=30148.m001410;gene=30148.t000009;note=30148.t000009;transcript=eq;prot=eq - 30148 No
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