Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005678 has 25 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 25 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G16830 aly name=scaffold_401728.1;pid=902227;prot=eq;tid=933740 - scaffold_4 No
AT2G31890 ath Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance.;RAP transcript=eq;prot=eq; - 2 No
BD1G78760 bdi pid=Bradi1g78760.1;tid=Bradi1g78760.1;GeneName=Bradi1g78760;transcript=eq;prot=eq - Bd1 No
BD4G45410 bdi pid=Bradi4g45410.1;tid=Bradi4g45410.1;GeneName=Bradi4g45410;transcript=eq;prot=eq - Bd4 No
CP00009G02380 cpa name=evm.TU.supercontig_9.238;pid=evm.TU.supercontig_9.238;prot=eq;transcript=eq - supercontig_9 No
CR02G11090 cre name=Chlre2_kg.scaffold_24000205;pid=148806;prot=eq;tid=148806;transcript=eq - chromosome_2 No
FV1G02530 fve Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic, Precursor (probable) transcript=eq;prot=eq;pid=gene10162 + LG1 No
GM03G01780 gma 03 pid=16250809;transcript=eq;prot=eq;name=Glyma03g01780.1 + Gm03 No
GM07G08250 gma 07 pid=16266624;transcript=eq;prot=eq;name=Glyma07g08250.1 + Gm07 No
MD11G011680 mdo transcript=eq;prot=eq;pid=MDP0000640130;tid=MDP0000640130;contig=MDC000442.224 + 11 No
ME06446G00410 mes PACid=17963055;RNAname=cassava4.1_034355m;GeneName=cassava4.1_034355m.g;transcript=ne;prot=eq + scaffold06446 No
OS03G31150 osa expressed protein transcript=eq;prot=eq; + 3 No
OSINDICA_03G29500 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC006988; + Chr03 No
PP00157G00230 ppa NULL name=e_gw1.157.66.1,pid=139437,prot=eq,tid=139437 + scaffold_157 No
PT07G00120 ptr PACid=17341464;name=POPTR_0007s00310;alias=pt025952m; transcript=eq;prot=eq;protein_id=17341464; - scaffold_7 No
PT17G00190 ptr PACid=17340332;name=POPTR_0017s00380;alias=pt028924m; transcript=eq;prot=eq;protein_id=17340332; + scaffold_17 No
RC28266G00020 rco name=28266.m000193;gene=28266.t000002;note=28266.t000002;transcript=eq;prot=eq - 28266 No
SB03G002900 sbi 3 prot=eq;pid=5052490;tid=5052490 - chr_3 No
SM00018G01620 smo proteinId=412574;transcriptId=412574;name=fgenesh2_pg.C_scaffold_18000150;transcript=eq;prot=eq + scaffold_18 No
SM00018G01650 smo proteinId=412577;transcriptId=412577;name=fgenesh2_pg.C_scaffold_18000153;transcript=eq;prot=eq - scaffold_18 No
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