Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM005561 has 26 genes in 24 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G18070 aly name=fgenesh2_kg.7__1887__AT4G24090.1;pid=492454;prot=eq;tid=492454 - scaffold_7 No
AT4G24090 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). transcript=eq;prot=eq; + 4 No
BD4G35850 bdi pid=Bradi4g35850.1;tid=Bradi4g35850.1;GeneName=Bradi4g35850;transcript=eq;prot=eq + Bd4 No
CP00175G00150 cpa name=evm.TU.supercontig_175.15;pid=evm.TU.supercontig_175.15;prot=eq;transcript=eq + supercontig_175 No
CR02G15410 cre name=Chlre2_kg.scaffold_24000081;pid=148682;prot=eq;tid=148682;transcript=eq - chromosome_2 No
FV0G42010 fve Probable DNA double-strand break repair rad50 ATPase transcript=eq;prot=eq;pid=gene01906 - scf0512956 No
GM00G00225 gma 48 pid=16242720;transcript=eq;prot=eq;name=Glyma0048s00250.1 - scaffold_48 No
LJ2G009560 lja prot=eq;transcript=eq;scaffold=CM0373;name=chr2.CM0373.870.nc - chr2 No
MD00G175380 mdo transcript=eq;prot=eq;pid=MDP0000280699;tid=MDP0000280699;contig=MDC007504.147 + MDC007504.147 No
MD13G011420 mdo transcript=eq;prot=eq;pid=MDP0000207324;tid=MDP0000207324;contig=MDC016362.52 - 13 No
ME04274G00070 mes PACid=17970894;RNAname=cassava4.1_012391m;GeneName=cassava4.1_012391m.g;transcript=eq;prot=eq - scaffold04274 No
MRCC299_05G05480 mrcc299 name=EuGene.0500010537;pid=58804;prot=eq;tid=58804;transcript=eq - Chr_05 No
MT3G005290 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr3g005290.1; + 3 No
OL16G01390 olu NULL name=fgenesh1_pg.C_Chr_16000090,pid=18525,prot=eq,tid=18525 - Chr_16 No
OS09G35990 osa expressed protein transcript=eq;prot=eq; - 9 No
OSINDICA_09G28270 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC029397; - Chr09 No
OT17G01360 ota name=OT17G01360;protein_id=CAL57863.1;prot=eq;partial=yes - chrom17 No
PP00534G00030 ppa NULL name=estExt_fgenesh1_kg.C_5340001,pid=110697,prot=eq,tid=110697 - scaffold_534 No
PT01G11110 ptr PACid=17312552;name=POPTR_0001s11300;alias=pt039371m; transcript=eq;prot=eq;protein_id=17312552; - scaffold_1 No
RC30068G00540 rco name=30068.m002564;gene=30068.t000054;note=30068.t000054;transcript=eq;prot=eq + 30068 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier