Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM005555 has 26 genes in 18 species (4 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G09010 aly name=fgenesh1_pm.C_scaffold_5000551;pid=323007;prot=eq;tid=323007 - scaffold_5 No
AT3G29330 ath unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, embryo; EXPRESSED DURING: D bilateral stage. transcript=eq;prot=eq; - 3 Yes
BD4G45110 bdi zinc ion binding (Blast2GO) pid=Bradi4g45110.1;tid=Bradi4g45110.1;GeneName=Bradi4g45110;transcript=eq;prot=eq + Bd4 No
BD4G45130 bdi zinc ion binding (Blast2GO) pid=Bradi4g45130.1;tid=Bradi4g45130.1;GeneName=Bradi4g45130;transcript=eq;prot=eq + Bd4 No
CP00094G00090 cpa name=evm.TU.supercontig_94.9;pid=evm.TU.supercontig_94.9;prot=eq;transcript=eq - supercontig_94 No
FV5G12590 fve Zinc finger protein 346 (Protein jaz) (probable) transcript=eq;prot=eq;pid=gene26079 + LG5 No
FV5G34070 fve Zinc finger protein 385B (probable) transcript=eq;prot=eq;pid=gene02220 + LG5 No
GM08G26510 gma 08 pid=16272542;transcript=eq;prot=eq;name=Glyma08g26510.1 - Gm08 No
GM18G49990 gma 18 pid=16310991;transcript=eq;prot=eq;name=Glyma18g49990.1 - Gm18 No
LJ0G052490 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_019602;name=LjSGA_019602.2 + LjSGA_019602 No
LJ0G195730 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_062424;name=LjSGA_062424.1 + LjSGA_062424 No
MD03G006650 mdo transcript=eq;prot=eq;pid=MDP0000229078;tid=MDP0000229078;contig=MDC025619.11 - 3 No
MD14G019810 mdo transcript=eq;prot=eq;pid=MDP0000127763;tid=MDP0000127763;contig=MDC013407.145 - 14 No
ME06609G00390 mes PACid=17983589;RNAname=cassava4.1_012711m;GeneName=cassava4.1_012711m.g;transcript=ne;prot=eq + scaffold06609 No
MT5G097950 mtr Zinc finger RNA-binding protein (AHRD V1 *-*- Q5U231); contains Interpro domain(s) IPR003604 Zinc finger, U1-type transcript=eq;prot=eq;pid=Medtr5g097950.1; - 5 No
OS10G17740 osa ZOS10%2D02 %2D C2H2 zinc finger protein, expressed transcript=eq;prot=eq; + 10 No
OSINDICA_10G10680 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC030323; + Chr10 No
PT17G12350 ptr PACid=17323594;name=POPTR_0017s12730;alias=pt029496m,eugene3.00170471; transcript=eq;prot=eq;protein_id=17323594; - scaffold_17 No
RC29630G00190 rco name=29630.m000794;gene=29630.t000019;note=29630.t000019;transcript=eq;prot=eq - 29630 No
RC29630G00200 rco name=29630.m000795;gene=29630.t000020;note=29630.t000020;transcript=eq;prot=eq - 29630 Yes
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