Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005545 has 26 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G02500 aly name=fgenesh2_kg.1__253__AT1G03190.1;pid=470299;prot=eq;tid=470299 + scaffold_1 No
AT1G03190 ath UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.;RAD3-like DNA-binding helicase protein transcript=eq;prot=eq; + 1 No
BD1G00427 bdi pid=Bradi1g00427.1;tid=Bradi1g00427.1;GeneName=Bradi1g00427;transcript=eq;prot=eq + Bd1 No
BD1G78740 bdi ATP-dependent 5'-3' DNA helicase activity (Blast2GO) pid=Bradi1g78740.1;tid=Bradi1g78740.1;GeneName=Bradi1g78740;transcript=eq;prot=eq - Bd1 No
BD2G36360 bdi ATP-dependent 5'-3' DNA helicase activity (Blast2GO) pid=Bradi2g36360.1;tid=Bradi2g36360.1;GeneName=Bradi2g36360;transcript=eq;prot=eq + Bd2 No
CR17G02160 cre name=e_gwH.13.18.1;pid=100548;prot=eq;tid=100548;transcript=eq + chromosome_17 No
FV2G25260 fve DNA repair helicase UVH6 (AtUVH6) (putative) transcript=eq;prot=eq;pid=gene27826 + LG2 No
GM02G09080 gma 02 pid=16247475;transcript=eq;prot=eq;name=Glyma02g09080.1 + Gm02 No
GM16G28290 gma 16 pid=16303177;transcript=eq;prot=eq;name=Glyma16g28290.1 + Gm16 No
MD02G021220 mdo transcript=eq;prot=eq;pid=MDP0000942613;tid=MDP0000942613;contig=MDC020077.271 - 2 No
ME11998G01060 mes PACid=17986321;RNAname=cassava4.1_002219m;GeneName=cassava4.1_002219m.g;transcript=eq;prot=eq + scaffold11998 No
MRCC299_02G00780 mrcc299 name=EuGene.0200010873;pid=56496;prot=eq;tid=56496;transcript=eq - Chr_02 No
OL12G02950 olu NULL name=eugene.1200010289,pid=26944,prot=eq,tid=26944 - Chr_12 No
OS05G05260 osa helicase, putative, expressed transcript=eq;prot=eq; - 5 No
OS06G33130 osa hypothetical protein transcript=eq;prot=eq; + 6 Yes
OSINDICA_05G04120 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC019652; - Chr05 No
OT12G02930 ota DNA repair/transcription factor protein (ISS); name=OT12G02930;protein_id=CAL57385.1;prot=eq - chrom12 No
PP00145G00090 ppa NULL name=estExt_Genewise1.C_1450011,pid=217649,prot=eq,tid=217649 + scaffold_145 No
PT02G05310 ptr PACid=17317920;name=POPTR_0002s05500;alias=pt019974m,eugene3.00020503,Pt-UVH6.1; transcript=eq;prot=eq;protein_id=17317920; + scaffold_2 No
RC29647G01060 rco name=29647.m002100;gene=29647.t000108;note=29647.t000108;transcript=eq;prot=eq + 29647 No
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