Gene family 
- Id
- HOM005521
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
- No subfamilies present
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (1 gene)
- ath
- Arabidopsis thaliana (1 gene)
- bdi
- Brachypodium distachyon (1 gene)
- cpa
- Carica papaya (1 gene)
- cre
- Chlamydomonas reinhardtii (1 gene)
- fve
- Fragaria vesca (1 gene)
- gma
- Glycine max (2 genes)
- mdo
- Malus domestica (1 gene)
- mes
- Manihot esculenta (1 gene)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- osa
- Oryza sativa ssp. japonica (1 gene)
- osaindica
- Oryza sativa ssp. indica (1 gene)
- ota
- Ostreococcus tauri (1 gene)
- ppa
- Physcomitrella patens (2 genes)
- ptr
- Populus trichocarpa (3 genes)
- rco
- Ricinus communis (1 gene)
- sbi
- Sorghum bicolor (1 gene)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (1 gene)
- vca
- Volvox carteri (1 gene)
- vvi
- Vitis vinifera (1 gene)
- zma
- Zea mays (1 gene)
The gene family HOM005521 has 26 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM005521
Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G16480 | aly | name=scaffold_301815.1;pid=897845;prot=eq;tid=929358 | - | scaffold_3 | No | |
| AT3G15520 | ath | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); BEST Arabidopsis thaliana protein match is: cyclophilin 38 (TAIR:AT3G01480.1); Has 713 Blast hits to 711 proteins in 154 species: Archae - 5; Bacteria - 374; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).;Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | transcript=eq;prot=eq; | - | 3 | No |
| BD1G24500 | bdi | pid=Bradi1g24500.1;tid=Bradi1g24500.1;GeneName=Bradi1g24500;transcript=eq;prot=eq | - | Bd1 | No | |
| CP00080G00990 | cpa | name=evm.TU.supercontig_80.99;pid=evm.TU.supercontig_80.99;prot=eq;transcript=eq | - | supercontig_80 | No | |
| CR06G11410 | cre | name=SKA_e_gwH.12.40.1;pid=205898;prot=eq;tid=205903;transcript=eq | + | chromosome_6 | No | |
| FV2G46040 | fve | Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic (PPIase CYP37), Precursor (similar to) | transcript=eq;prot=eq;pid=gene31153 | - | LG2 | No |
| GM06G38470 | gma | 06 | pid=16264554;transcript=eq;prot=eq;name=Glyma06g38470.1 | - | Gm06 | No |
| GM12G22700 | gma | 12 | pid=16287964;transcript=eq;prot=eq;name=Glyma12g22700.1 | + | Gm12 | No |
| MD03G019280 | mdo | transcript=eq;prot=eq;pid=MDP0000482092;tid=MDP0000482092;contig=MDC035786.11 | + | 3 | No | |
| ME03000G00330 | mes | PACid=17979773;RNAname=cassava4.1_006722m;GeneName=cassava4.1_006722m.g;transcript=eq;prot=eq | + | scaffold03000 | No | |
| MRCC299_05G07380 | mrcc299 | name=e_gw2.05.219.1;pid=81505;prot=eq;tid=81505;transcript=eq | + | Chr_05 | No | |
| OS07G37830 | osa | peptidyl%2Dprolyl cis%2Dtrans isomerase CYP37, chloroplast precursor, putative, expressed | transcript=eq;prot=eq; | + | 7 | No |
| OSINDICA_07G30120 | osaindica | source=BGI China;type=FgeneSH; | transcript=eq;prot=eq;name=OsIFCC024115; | + | Chr07 | No |
| OT17G01840 | ota | peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase (ISS); | name=OT17G01840;protein_id=CAL57911.1;prot=eq | - | chrom17 | No |
| PP00037G00490 | ppa | NULL | name=e_gw1.37.228.1,pid=121649,prot=eq,tid=121649 | - | scaffold_37 | No |
| PP00204G00620 | ppa | NULL | name=e_gw1.204.82.1,pid=143508,prot=eq,tid=143508 | + | scaffold_204 | No |
| PT01G40570 | ptr | PACid=17305157;name=POPTR_0001s41520;alias=pt041484m; | transcript=eq;prot=eq;protein_id=17305157; | - | scaffold_1 | No |
| PT01G40580 | ptr | PACid=17338697;name=POPTR_0001s41530;alias=pt039528m; | transcript=eq;prot=eq;protein_id=17338697; | - | scaffold_1 | No |
| PT11G11690 | ptr | PACid=17549263;name=POPTR_0011s12450;alias=pta000974m; | transcript=eq;prot=eq;protein_id=17549263; | - | scaffold_11 | No |
| RC29716G00120 | rco | name=29716.m000309;gene=29716.t000012;note=29716.t000012;transcript=eq;prot=eq | - | 29716 | No |