Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005479 has 26 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 26 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT3G52115 ath Induced in response to ionizing radiation, shows basal expression in mitotically active cells and high expression in endoreduplicating cells. May be involved in DNA damage-induced growth arrest. Protein sequence contains a PEST destruction box.;gamma response gene 1 transcript=eq;prot=eq; + 3 No
BD1G36000 bdi Sae2/COM1 pid=Bradi1g36000.1;tid=Bradi1g36000.1;GeneName=Bradi1g36000;Name=BdSae2/COM1;transcript=eq;prot=eq - Bd1 No
CP00234G00090 cpa name=evm.TU.supercontig_234.9;pid=evm.TU.supercontig_234.9;prot=eq;transcript=eq + supercontig_234 No
FV7G02060 fve Protein gamma response 1 (probable) transcript=eq;prot=eq;pid=gene26973 - LG7 No
GM12G36730 gma 12 pid=16289129;transcript=eq;prot=eq;name=Glyma12g36730.1 + Gm12 No
GM13G27420 gma 13 pid=16291751;transcript=eq;prot=eq;name=Glyma13g27420.1 + Gm13 No
LJ3G005210 lja prot=eq;transcript=eq;scaffold=LjT46L11;name=chr3.LjT46L11.100.nc - chr3 No
MD00G269910 mdo transcript=eq;prot=eq;pid=MDP0000471340;tid=MDP0000471340;contig=MDC011563.111 + MDC011563.111 No
MD00G419490 mdo transcript=eq;prot=eq;pid=MDP0000244466;tid=MDP0000244466;contig=MDC019135.173 + MDC019135.173 No
MD02G029650 mdo transcript=eq;prot=eq;pid=MDP0000315497;tid=MDP0000315497;contig=MDC022702.107 + 2 No
MD07G000510 mdo transcript=eq;prot=eq;pid=MDP0000263152;tid=MDP0000263152;contig=MDC017528.105 - 7 No
ME06407G00260 mes PACid=17974299;RNAname=cassava4.1_026532m;GeneName=cassava4.1_026532m.g;transcript=eq;prot=eq - scaffold06407 No
ME11106G00380 mes PACid=17986807;RNAname=cassava4.1_027973m;GeneName=cassava4.1_027973m.g;transcript=eq;prot=eq - scaffold11106 No
MRCC299_05G04740 mrcc299 name=fgenesh2_pg.C_Chr_05000318;pid=100625;prot=eq;tid=100625;transcript=eq + Chr_05 No
MT8G036940 mtr Protein gamma response 1 (AHRD V1 *-*- Q9ZRT1); contains Interpro domain(s) IPR013882 DNA repair protein Sae2/CtIP transcript=eq;prot=eq;pid=Medtr8g036940.1; - 8 No
OS06G41050 osa expressed protein transcript=eq;prot=eq; + 6 No
OSINDICA_06G36740 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC011454; + Chr06 No
OSINDICA_06G36800 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC011459; + Chr06 No
PT01G26890 ptr PACid=17339006;name=POPTR_0001s27650;alias=pt037836m,eugene3.00011781,Pt-GR1.2; transcript=eq;prot=eq;protein_id=17339006; + scaffold_1 No
PT09G06680 ptr PACid=17302548;name=POPTR_0009s06870;alias=pt004249m; transcript=eq;prot=eq;protein_id=17302548; + scaffold_9 No
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