Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005448 has 27 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G21710 aly name=fgenesh2_kg.4__1663__AT2G36305.1;pid=482603;prot=eq;tid=482603 + scaffold_4 No
AT2G36305 ath Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast.;farnesylated protein-converting enzyme 2 transcript=eq;prot=eq; + 2 No
BD2G28087 bdi pid=Bradi2g28087.1;tid=Bradi2g28087.1;GeneName=Bradi2g28087;transcript=eq;prot=eq - Bd2 No
CR01G08720 cre name=pasa_Sanger_mRNA2604;pid=406035;prot=eq;tid=392806;transcript=eq - chromosome_1 No
FV6G18430 fve CAAX prenyl protease 2 (AtFACE-2) (probable) transcript=eq;prot=eq;pid=gene30273 + LG6 No
GM10G08320 gma 10 pid=16278972;transcript=eq;prot=eq;name=Glyma10g08320.1 - Gm10 No
GM13G22010 gma 13 pid=16291138;transcript=eq;prot=eq;name=Glyma13g22010.1 - Gm13 No
LJ5G009490 lja prot=eq;transcript=eq;scaffold=CM0657;name=chr5.CM0657.280.nd + chr5 No
LJ5G009520 lja partial;prot=eq;transcript=eq;scaffold=CM0657;name=chr5.CM0657.310.nd + chr5 No
LJ5G009530 lja partial;prot=eq;transcript=eq;scaffold=CM0657;name=chr5.CM0657.320.nd + chr5 No
MD00G047810 mdo transcript=eq;prot=eq;pid=MDP0000161368;tid=MDP0000161368;contig=MDC001998.263 - MDC001998.263 No
MD00G465170 mdo transcript=eq;prot=eq;pid=MDP0000218367;tid=MDP0000218367;contig=MDC021535.284 - MDC021535.284 No
MD12G002030 mdo transcript=eq;prot=eq;pid=MDP0000145511;tid=MDP0000145511;contig=MDC020034.222 - 12 No
ME01664G00150 mes PACid=17979013;RNAname=cassava4.1_016174m;GeneName=cassava4.1_016174m.g;transcript=eq;prot=eq + scaffold01664 No
MRCC299_14G01160 mrcc299 name=gw2.14.481.1;pid=76762;prot=eq;tid=76762;transcript=eq + Chr_14 No
OS05G28950 osa CAAX amino terminal protease family protein, putative, expressed transcript=eq;prot=eq; + 5 No
PP00013G01160 ppa NULL name=e_gw1.13.148.1,pid=115539,prot=eq,tid=115539 + scaffold_13 No
PT06G08140 ptr PACid=17331470;name=POPTR_0006s08330;alias=pt019357m; transcript=eq;prot=eq;protein_id=17331470; - scaffold_6 No
PT06G08150 ptr PACid=17314792;name=POPTR_0006s08340;alias=pt018434m,grail3.0023015801; transcript=eq;prot=eq;protein_id=17314792; - scaffold_6 No
RC29625G00160 rco name=29625.m000690;gene=29625.t000017;note=29625.t000017;transcript=eq;prot=eq - 29625 No
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