Gene family  

Sub-families
ORTHO007380 (23 genes in 20 species)
ORTHO058023 (2 genes in 2 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family HOM005441 has 27 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G38270 aly name=fgenesh2_kg.6__3398__AT4G02980.1;pid=490264;prot=eq;tid=490264 + scaffold_6 No
AT4G02980 ath Auxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2.;endoplasmic reticulum auxin binding protein 1 transcript=eq;prot=eq; - 4 No
BD4G06030 bdi pid=Bradi4g06030.1;tid=Bradi4g06030.1;GeneName=Bradi4g06030;transcript=eq;prot=eq + Bd4 No
CP00009G01210 cpa name=evm.TU.supercontig_9.121;pid=evm.TU.supercontig_9.121;prot=eq;transcript=eq - supercontig_9 No
FV2G25830 fve Auxin-binding protein T85 (ABP), Precursor (similar to) transcript=eq;prot=eq;pid=gene27729 - LG2 No
GM02G16890 gma 02 pid=16248335;transcript=eq;prot=eq;name=Glyma02g16890.1 - Gm02 No
LJ5G021440 lja prot=eq;transcript=eq;scaffold=CM0909;name=chr5.CM0909.50.nc + chr5 No
MD00G421840 mdo transcript=eq;prot=eq;pid=MDP0000459936;tid=MDP0000459936;contig=MDC019260.152 - MDC019260.152 No
MD03G023380 mdo transcript=eq;prot=eq;pid=MDP0000707508;tid=MDP0000707508;contig=MDC010097.253 - 3 No
ME04457G01490 mes PACid=17981540;RNAname=cassava4.1_015298m;GeneName=cassava4.1_015298m.g;transcript=eq;prot=eq + scaffold04457 No
ME11998G01380 mes PACid=17986158;RNAname=cassava4.1_016868m;GeneName=cassava4.1_016868m.g;transcript=eq;prot=eq - scaffold11998 No
MT1G089810 mtr Auxin binding protein 1 (AHRD V1 **** B6VB01_ARAHY); contains Interpro domain(s) IPR000526 Auxin-binding protein transcript=eq;prot=eq;pid=Medtr1g089810.1; + 1 No
OS12G34450 osa auxin%2Dbinding protein 4 precursor, putative, expressed transcript=eq;prot=eq; + 12 No
OS12G34460 osa auxin%2Dbinding protein 4 precursor, putative, expressed transcript=eq;prot=eq; + 12 No
OSINDICA_12G23100 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC033278; + Chr12 No
PP00339G00260 ppa NULL name=e_gw1.339.27.1,pid=151546,prot=eq,tid=151546 - scaffold_339 No
PT02G22540 ptr PACid=17344016;name=POPTR_0002s22920;alias=pt021592m; transcript=eq;prot=eq;protein_id=17344016; - scaffold_2 No
PT14G13180 ptr PACid=17331218;name=POPTR_0014s13370;alias=pt036739m; transcript=eq;prot=eq;protein_id=17331218; + scaffold_14 No
RC29703G00730 rco name=29703.m001537;gene=29703.t000073;note=29703.t000073;transcript=eq;prot=eq + 29703 No
SB08G016760 sbi 8 prot=eq;pid=5059599;tid=5059599 + chr_8 No
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