Gene family  

Sub-families
ORTHO007442 (23 genes in 23 species)
ORTHO056913 (2 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (2 genes)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005438 has 27 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G26730 aly name=scaffold_702837.1;pid=915095;prot=eq;tid=946608 - scaffold_7 No
AT4G16510 ath YbaK/aminoacyl-tRNA synthetase-associated domain; CONTAINS InterPro DOMAIN/s: YbaK/aminoacyl-tRNA synthetase-associated domain (InterPro:IPR007214); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;YbaK/aminoacyl-tRNA synthetase-associated domain transcript=eq;prot=eq; + 4 No
BD3G50910 bdi pid=Bradi3g50910.1;tid=Bradi3g50910.1;GeneName=Bradi3g50910;transcript=eq;prot=eq + Bd3 No
CP00276G00060 cpa name=evm.TU.supercontig_276.6;pid=evm.TU.supercontig_276.6;prot=eq;transcript=eq + supercontig_276 No
CR07G05450 cre name=OVA_estExt_fgenesh2_pg.C_500012;pid=205706;prot=eq;tid=205711;transcript=eq + chromosome_7 No
FV5G00100 fve Serase-3 (probable) transcript=eq;prot=eq;pid=gene31758 - LG5 No
GM05G04530 gma 05 pid=16258312;transcript=eq;prot=eq;name=Glyma05g04530.1 + Gm05 No
LJ0G075810 lja prot=eq;transcript=eq;scaffold=LjSGA_025610;name=LjSGA_025610.1 + LjSGA_025610 No
LJ0G093440 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_030346;name=LjSGA_030346.1 + LjSGA_030346 No
MD00G283280 mdo transcript=eq;prot=eq;pid=MDP0000294187;tid=MDP0000294187;contig=MDC012102.240 + MDC012102.240 No
MD00G516760 mdo transcript=eq;prot=eq;pid=MDP0000154696;tid=MDP0000154696;contig=MDC041559.10 + MDC041559.10 No
MD08G009030 mdo transcript=eq;prot=eq;pid=MDP0000161599;tid=MDP0000161599;contig=MDC002234.118 - 8 No
ME11581G00310 mes PACid=17976382;RNAname=cassava4.1_015163m;GeneName=cassava4.1_015163m.g;transcript=eq;prot=eq + scaffold11581 No
MRCC299_07G06110 mrcc299 name=fgenesh2_pg.C_Chr_07000389;pid=101645;prot=eq;tid=101645;transcript=eq + Chr_07 No
MT4G101100 mtr Unknown Protein (AHRD V1); contains Interpro domain(s) IPR007214 YbaK/aminoacyl-tRNA synthetase associated region transcript=eq;prot=eq;pid=Medtr4g101100.1; - 4 No
OS02G44330 osa rho guanine nucleotide exchange factor, putative, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_02G42710 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC014942; + Chr02 No
PP00018G00450 ppa NULL name=e_gw1.18.103.1,pid=117069,prot=eq,tid=117069 - scaffold_18 No
PT01G00260 ptr PACid=17549067;name=POPTR_0001s00450;alias=pta000741m; transcript=eq;prot=eq;protein_id=17549067; + scaffold_1 No
PT03G10090 ptr PACid=17308172;name=POPTR_0003s11040;alias=pt023916m,fgenesh4_pm.C_LG_III000325; transcript=eq;prot=eq;protein_id=17308172; - scaffold_3 No
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