Gene family  

Sub-families
ORTHO007305 (23 genes in 20 species)
ORTHO041046 (3 genes in 1 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (4 genes)



The gene family HOM005420 has 27 genes in 19 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G02600 aly name=fgenesh2_kg.6__256__AT5G03455.1;pid=487122;prot=eq;tid=487122 + scaffold_6 No
AT5G03455 ath Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.;Rhodanese/Cell cycle control phosphatase superfamily protein transcript=eq;prot=eq; + 5 No
BD1G78020 bdi phosphoprotein phosphatase activity (Blast2GO) pid=Bradi1g78020.1;tid=Bradi1g78020.1;GeneName=Bradi1g78020;transcript=eq;prot=eq + Bd1 No
BD3G32550 bdi phosphoprotein phosphatase activity (Blast2GO) pid=Bradi3g32550.1;tid=Bradi3g32550.1;GeneName=Bradi3g32550;transcript=eq;prot=eq + Bd3 No
CP00456G00020 cpa name=evm.TU.supercontig_456.2;pid=evm.TU.supercontig_456.2;prot=eq;transcript=eq - supercontig_456 No
FV6G49630 fve Dual specificity phosphatase Cdc25 (similar to) transcript=eq;prot=eq;pid=gene09674 + LG6 No
GM03G34200 gma 03 pid=16253282;transcript=eq;prot=eq;name=Glyma03g34200.1 + Gm03 No
GM19G36900 gma 19 pid=16314021;transcript=eq;prot=eq;name=Glyma19g36900.1 + Gm19 No
LJ1G049860 lja prot=eq;transcript=eq;scaffold=CM0012;name=chr1.CM0012.260.nd + chr1 No
MD00G445410 mdo transcript=eq;prot=eq;pid=MDP0000143502;tid=MDP0000143502;contig=MDC020439.66 + MDC020439.66 No
ME04758G00020 mes PACid=17982525;RNAname=cassava4.1_018959m;GeneName=cassava4.1_018959m.g;transcript=eq;prot=eq - scaffold04758 No
MT7G102310 mtr Dual specificity phosphatase Cdc25 (AHRD V1 **** Q8GY31); contains Interpro domain(s) IPR001763 Rhodanese-like transcript=eq;prot=eq;pid=Medtr7g102310.1; + 7 No
OS03G01770 osa rhodanese, putative, expressed transcript=eq;prot=eq; - 3 No
OS10G39860 osa expressed protein transcript=eq;prot=eq; + 10 No
OSINDICA_03G00850 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC004896; - Chr03 No
OSINDICA_10G30170 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC031600; + Chr10 No
PP00021G01180 ppa NULL name=e_gw1.21.135.1,pid=117783,prot=eq,tid=117783 - scaffold_21 No
PT06G12270 ptr PACid=17304226;name=POPTR_0006s12460;alias=pt019282m; transcript=eq;prot=eq;protein_id=17304226; - scaffold_6 No
RC30180G00420 rco name=30180.m001055;gene=30180.t000045;note=30180.t000045;transcript=eq;prot=eq - 30180 No
SB01G030120 sbi 1 prot=eq;pid=5049123;tid=5049123 - chr_1 No
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