Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (3 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005410 has 27 genes in 22 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G21220 aly name=scaffold_402193.1;pid=902692;prot=eq;tid=934205 + scaffold_4 No
AT2G35790 ath unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). transcript=eq;prot=eq; + 2 No
BD1G01227 bdi pid=Bradi1g01227.1;tid=Bradi1g01227.1;GeneName=Bradi1g01227;transcript=eq;prot=eq + Bd1 No
CP00053G00430 cpa name=evm.TU.supercontig_53.43;pid=evm.TU.supercontig_53.43;prot=eq;transcript=eq - supercontig_53 No
FV7G24350 fve Transmembrane protein 70 homolog, mitochondrial, Precursor (probable) transcript=eq;prot=eq;pid=gene23214 + LG7 No
GM17G23520 gma 17 pid=16306325;transcript=eq;prot=eq;name=Glyma17g23520.1 + Gm17 No
MD00G273990 mdo transcript=eq;prot=eq;pid=MDP0000361052;tid=MDP0000361052;contig=MDC011711.503 + MDC011711.503 Yes
MD01G009160 mdo transcript=eq;prot=eq;pid=MDP0000174775;tid=MDP0000174775;contig=MDC003059.416 + 1 No
MD07G015280 mdo transcript=eq;prot=eq;pid=MDP0000205054;tid=MDP0000205054;contig=MDC012623.194 + 7 No
ME12004G00640 mes PACid=17973777;RNAname=cassava4.1_015164m;GeneName=cassava4.1_015164m.g;transcript=eq;prot=eq + scaffold12004 No
MRCC299_11G01580 mrcc299 name=EuGene.1100010160;pid=62374;prot=eq;tid=62374;transcript=eq + Chr_11 No
OL02G05760 olu NULL name=ost_02_022_001,pid=92336,prot=eq,tid=92336 - Chr_2 No
OS03G63680 osa expressed protein transcript=eq;prot=eq; + 3 No
OSINDICA_03G60730 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009019; + Chr03 No
OSINDICA_03G60750 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC009021; + Chr03 No
OT02G07410 ota name=OT02G07410;protein_id=CAL52616.1;prot=eq;partial=yes - chrom02 No
PP00145G00900 ppa NULL name=e_gw1.145.65.1,pid=138264,prot=eq,tid=138264 + scaffold_145 No
PT08G04050 ptr PACid=17323281;name=POPTR_0008s04240;alias=pt027721m,eugene3.00080366; transcript=eq;prot=eq;protein_id=17323281; - scaffold_8 No
PT10G21440 ptr PACid=17339209;name=POPTR_0010s22580;alias=pt012583m; transcript=eq;prot=eq;protein_id=17339209; - scaffold_10 No
PT10G21470 ptr PACid=17319760;name=POPTR_0010s22610;alias=pt012499m; transcript=eq;prot=eq;protein_id=17319760; + scaffold_10 No
<< previous
1 | 2 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier