Gene family  

Sub-families
ORTHO012141 (16 genes in 11 species)
ORTHO016771 (8 genes in 5 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (3 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (4 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM005312 has 27 genes in 15 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT1G27850 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.1); Has 9215 Blast hits to 5316 proteins in 473 species: Archae - 6; Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539; Viruses - 143; Other Eukaryotes - 2652 (source: NCBI BLink). transcript=eq;prot=eq; + 1 No
BD4G39540 bdi pid=Bradi4g39540.1;tid=Bradi4g39540.1;GeneName=Bradi4g39540;transcript=eq;prot=eq + Bd4 No
CP26951G00010 cpa name=evm.TU.contig_26951.1;pid=evm.TU.contig_26951.1;prot=eq;transcript=eq + contig_26951 No
CP26951G00020 cpa name=evm.TU.contig_26951.2;pid=evm.TU.contig_26951.2;prot=eq;transcript=eq + contig_26951 No
CP44110G00010 cpa name=evm.TU.contig_44110.1;pid=evm.TU.contig_44110.1;prot=eq;transcript=eq - contig_44110 No
FV0G12170 fve Protein MSB2 (probable) transcript=eq;prot=eq;pid=gene07114 + scf0513160 No
GM05G27780 gma 05 pid=16259854;transcript=eq;prot=eq;name=Glyma05g27780.1 + Gm05 No
GM08G10770 gma 08 pid=16270689;transcript=eq;prot=eq;name=Glyma08g10770.1 + Gm08 No
GM11G37300 gma 11 pid=16285687;transcript=eq;prot=eq;name=Glyma11g37300.1 - Gm11 No
GM18G01260 gma 18 pid=16307553;transcript=eq;prot=eq;name=Glyma18g01260.1 - Gm18 No
ME04175G00980 mes PACid=17963320;RNAname=cassava4.1_000494m;GeneName=cassava4.1_000494m.g;transcript=eq;prot=eq + scaffold04175 No
ME07543G00280 mes PACid=17978271;RNAname=cassava4.1_000503m;GeneName=cassava4.1_000503m.g;transcript=eq;prot=eq + scaffold07543 No
MT2G025250 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr2g025250.1; + 2 No
MT3G085680 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr3g085680.1; - 3 No
OS12G13660 osa expressed protein transcript=eq;prot=eq; - 12 No
OS12G13670 osa expressed protein transcript=eq;prot=eq; - 12 No
OSINDICA_12G10780 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032562; - Chr12 No
OSINDICA_12G10790 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC032563; - Chr12 No
PT08G17680 ptr PACid=17338422;name=POPTR_0008s17870;alias=pt026414m,eugene3.00081664; transcript=eq;prot=eq;protein_id=17338422; - scaffold_8 No
PT10G05490 ptr PACid=17308565;name=POPTR_0010s06630;alias=pt011083m,fgenesh4_pm.C_LG_X000178; transcript=eq;prot=eq;protein_id=17308565; + scaffold_10 No
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