Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005294 has 27 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G04210 aly name=scaffold_300463.1;pid=896493;prot=eq;tid=928006 - scaffold_3 No
AT3G04560 ath unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 16 growth stages; Has 227 Blast hits to 225 proteins in 83 species: Archae - 0; Bacteria - 17; Metazoa - 98; Fungi - 29; Plants - 51; Viruses - 1; Other Eukaryotes - 31 (source: NCBI BLink). transcript=eq;prot=eq; - 3 No
BD3G55690 bdi pid=Bradi3g55690.1;tid=Bradi3g55690.1;GeneName=Bradi3g55690;transcript=eq;prot=eq - Bd3 No
CP00162G00150 cpa name=evm.TU.supercontig_162.15;pid=evm.TU.supercontig_162.15;prot=eq;transcript=eq + supercontig_162 No
CR02G06840 cre name=Chlre2_kg.scaffold_5000231;pid=141821;prot=eq;tid=141821;transcript=eq + chromosome_2 No
FV0G26060 fve Protein SCAR3 (AtSCAR3) (probable) transcript=eq;prot=eq;pid=gene16615 + scf0513168 No
GM10G31010 gma 10 pid=16280527;transcript=eq;prot=eq;name=Glyma10g31010.1 - Gm10 No
GM20G36470 gma 20 pid=16318069;transcript=eq;prot=eq;name=Glyma20g36470.1 + Gm20 No
LJ5G016930 lja prot=eq;transcript=eq;scaffold=LjT09B23;name=chr5.LjT09B23.80.nd + chr5 No
MD04G018680 mdo transcript=eq;prot=eq;pid=MDP0000253746;tid=MDP0000253746;contig=MDC021258.165 + 4 No
MD12G024140 mdo transcript=eq;prot=eq;pid=MDP0000899408;tid=MDP0000899408;contig=MDC021258.163 + 12 No
ME03802G00370 mes PACid=17989369;RNAname=cassava4.1_008870m;GeneName=cassava4.1_008870m.g;transcript=eq;prot=eq - scaffold03802 No
MRCC299_04G05110 mrcc299 name=EuGene.0400010519;pid=57990;prot=eq;tid=57990;transcript=eq + Chr_04 No
MT1G079830 mtr Unknown Protein (AHRD V1) transcript=eq;prot=eq;pid=Medtr1g079830.1; + 1 No
OL06G01080 olu NULL name=fgenesh1_pg.C_Chr_6000074,pid=15687,prot=eq,tid=15687 + Chr_6 No
OS02G57500 osa expressed protein transcript=eq;prot=eq; - 2 No
OSINDICA_02G55700 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC015888; - Chr02 No
OT06G01260 ota name=OT06G01260;protein_id=CAL53385.1;prot=eq + chrom06 No
PP00175G00280 ppa NULL name=estExt_fgenesh1_pg.C_1750029,pid=168414,prot=eq,tid=168414 - scaffold_175 No
PT13G03990 ptr PACid=17303171;name=POPTR_0013s04180;alias=pt030749m,estExt_fgenesh4_pm.C_LG_XIII0190; transcript=eq;prot=eq;protein_id=17303171; + scaffold_13 No
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