Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005268 has 27 genes in 21 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 27 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL5G30030 aly name=fgenesh2_kg.5__2410__AT3G59520.1;pid=486418;prot=eq;tid=486418 + scaffold_5 No
AT3G59520 ath RHOMBOID-like protein 13 (RBL13); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 15 (TAIR:AT3G58460.2); Has 1791 Blast hits to 1791 proteins in 774 species: Archae - 24; Bacteria - 1315; Metazoa - 107; Fungi - 76; Plants - 130; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink).;RHOMBOID-like protein 13 transcript=eq;prot=eq; + 3 No
BD2G57550 bdi pid=Bradi2g57550.1;tid=Bradi2g57550.1;GeneName=Bradi2g57550;transcript=eq;prot=eq - Bd2 No
CP00009G02920 cpa name=evm.TU.supercontig_9.292;pid=evm.TU.supercontig_9.292;prot=eq;transcript=eq + supercontig_9 No
CR18G00310 cre name=Chlre2_kg.scaffold_41000036;pid=151844;prot=eq;tid=151844;transcript=eq + scaffold_18 No
FV0G39430 fve Rhomboid protein 2 (probable) transcript=eq;prot=eq;pid=gene28475 - scf0513124 No
GM11G13550 gma 11 pid=16283764;transcript=eq;prot=eq;name=Glyma11g13550.1 - Gm11 No
GM12G05550 gma 12 pid=16286517;transcript=eq;prot=eq;name=Glyma12g05550.1 - Gm12 No
MD00G013930 mdo transcript=eq;prot=eq;pid=MDP0000156852;tid=MDP0000156852;contig=MDC000580.372 - MDC000580.372 No
MD00G350890 mdo transcript=eq;prot=eq;pid=MDP0000213305;tid=MDP0000213305;contig=MDC015724.144 - MDC015724.144 Yes
MD00G446720 mdo transcript=eq;prot=eq;pid=MDP0000736627;tid=MDP0000736627;contig=MDC020495.155 - MDC020495.155 No
MD10G000220 mdo transcript=eq;prot=eq;pid=MDP0000443139;tid=MDP0000443139;contig=MDC001367.546 + 10 No
ME03160G00110 mes PACid=17988268;RNAname=cassava4.1_034412m;GeneName=cassava4.1_034412m.g;transcript=eq;prot=eq - scaffold03160 No
ME05926G00060 mes PACid=17991452;RNAname=cassava4.1_013890m;GeneName=cassava4.1_013890m.g;transcript=eq;prot=eq - scaffold05926 No
MRCC299_07G04480 mrcc299 name=gw2.07.372.1;pid=72121;prot=eq;tid=72121;transcript=eq - Chr_07 No
OS01G67040 osa OsRhmbd5 %2D Putative Rhomboid homologue, expressed transcript=eq;prot=eq; + 1 No
OSINDICA_01G63660 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC037290; + Chr01 No
PP00017G00050 ppa NULL name=estExt_gwp_gw1.C_170005,pid=176369,prot=eq,tid=176369 - scaffold_17 No
PT07G01610 ptr PACid=17342098;name=POPTR_0007s01800;alias=pt025703m,eugene3.00070158; transcript=eq;prot=eq;protein_id=17342098; - scaffold_7 No
PT17G05460 ptr PACid=17341084;name=POPTR_0017s05650;alias=pt029548m; transcript=eq;prot=eq;protein_id=17341084; - scaffold_17 No
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