Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (2 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (1 gene)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM005201 has 28 genes in 25 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G17270 aly name=fgenesh2_kg.7__1783__AT4G24880.1;pid=492350;prot=eq;tid=492350 - scaffold_7 No
AT4G24880 ath unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transcript=eq;prot=eq; + 4 No
BD2G03710 bdi pid=Bradi2g03710.1;tid=Bradi2g03710.1;GeneName=Bradi2g03710;transcript=eq;prot=eq + Bd2 No
CP02981G00020 cpa name=evm.TU.supercontig_2981.2;pid=evm.TU.supercontig_2981.2;prot=eq;transcript=eq + supercontig_2981 No
CR16G03790 cre name=Chlre2_kg.scaffold_67000016;pid=153740;prot=eq;tid=153740;transcript=eq + chromosome_16 No
FV0G10120 fve Snurportin-1 (probable) transcript=eq;prot=eq;pid=gene06332 - scf0513158 No
FV4G09230 fve Snurportin-1 (probable) transcript=eq;prot=eq;pid=gene22479 + LG4 No
GM04G37160 gma 04 pid=16257016;transcript=eq;prot=eq;name=Glyma04g37160.1 + Gm04 No
GM06G17890 gma 06 pid=16263337;transcript=eq;prot=eq;name=Glyma06g17890.1 - Gm06 No
LJ0G139930 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_043780;name=LjSGA_043780.1 - LjSGA_043780 No
MD00G181490 mdo transcript=eq;prot=eq;pid=MDP0000894933;tid=MDP0000894933;contig=MDC007787.396 - MDC007787.396 No
ME09876G00280 mes PACid=17967417;RNAname=cassava4.1_008205m;GeneName=cassava4.1_008205m.g;transcript=eq;prot=eq + scaffold09876 No
MRCC299_04G04480 mrcc299 name=DRO_EuGene.0400010454;pid=113598;prot=eq;tid=113598;transcript=eq - Chr_04 No
MT3G089180 mtr Unknown Protein (AHRD V1) transcript=eq;warning:contains inframe stop codonspid=Medtr3g089180.1; + 3 No
OL08G01360 olu NULL name=eugene.0800010136,pid=33010,prot=eq,tid=33010 + Chr_8 No
OS01G01130 osa snurportin%2D1, putative, expressed transcript=eq;prot=eq; - 1 No
OSINDICA_01G00160 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC000013; - Chr01 No
OT08G01440 ota m3G-cap-specific nuclear import receptor (Snurportin1) (ISS); name=OT08G01440;protein_id=CAL54883.1;prot=eq + chrom08 No
PP00062G00400 ppa NULL name=e_gw1.62.28.1,pid=126961,prot=eq,tid=126961 - scaffold_62 No
PT15G09790 ptr PACid=17312484;name=POPTR_0015s10740;alias=pt000604m,estExt_fgenesh4_pg.C_LG_XV0701; transcript=eq;prot=eq;protein_id=17312484; + scaffold_15 No
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