Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ptr
Populus trichocarpa (2 genes)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005199 has 28 genes in 20 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G09410 aly name=fgenesh2_kg.3__941__AT3G09250.1;pid=478240;prot=eq;tid=478240 + scaffold_3 No
AT3G09250 ath Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3).;Nuclear transport factor 2 (NTF2) family protein transcript=eq;prot=eq; + 3 No
BD2G50100 bdi pid=Bradi2g50100.1;tid=Bradi2g50100.1;GeneName=Bradi2g50100;transcript=eq;prot=eq - Bd2 No
BD3G53720 bdi pid=Bradi3g53720.1;tid=Bradi3g53720.1;GeneName=Bradi3g53720;transcript=eq;prot=eq - Bd3 No
CP00056G00590 cpa name=evm.TU.supercontig_56.59;pid=evm.TU.supercontig_56.59;prot=eq;transcript=eq - supercontig_56 No
CR08G03690 cre name=pm.chromosome_8_#_125;pid=337897;prot=eq;tid=337904;transcript=eq + chromosome_8 No
FV6G11710 fve F-box protein SKIP8 (probable) transcript=eq;prot=eq;pid=gene18750 + LG6 No
GM01G26600 gma 01 pid=16244500;transcript=eq;prot=eq;name=Glyma01g26600.1 - Gm01 No
GM03G15880 gma 03 pid=16251778;transcript=eq;prot=eq;name=Glyma03g15880.1 + Gm03 No
MD04G011360 mdo transcript=eq;prot=eq;pid=MDP0000270944;tid=MDP0000270944;contig=MDC002795.218 - 4 No
MD12G016440 mdo transcript=eq;prot=eq;pid=MDP0000298312;tid=MDP0000298312;contig=MDC011615.255 - 12 No
ME03651G00370 mes PACid=17986401;RNAname=cassava4.1_014560m;GeneName=cassava4.1_014560m.g;transcript=eq;prot=eq + scaffold03651 No
ME07708G00090 mes PACid=17962325;RNAname=cassava4.1_031063m;GeneName=cassava4.1_031063m.g;transcript=eq;prot=eq + scaffold07708 No
MRCC299_10G05330 mrcc299 name=e_gw2.10.586.1;pid=86078;prot=eq;tid=86078;transcript=eq + Chr_10 No
OL16G00190 olu NULL name=gwEuk.16.231.1,pid=7291,prot=eq,tid=7291 - Chr_16 No
OS01G54960 osa expressed protein transcript=eq;prot=eq; - 1 No
OS02G54710 osa expressed protein transcript=eq;prot=eq; - 2 No
OSINDICA_01G51840 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC003454; - Chr01 No
OSINDICA_02G52950 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC015664; - Chr02 No
OT17G00190 ota name=OT17G00190;protein_id=CAL57746.1;prot=eq - chrom17 No
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