Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (2 genes)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (3 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM005194 has 28 genes in 21 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL7G11780 aly name=fgenesh2_kg.7__1204__AT4G29870.1;pid=491771;prot=eq;tid=491771 - scaffold_7 No
AT2G19340 ath Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT4G29870.1); Has 214 Blast hits to 214 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 151; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).;Oligosaccharyltransferase complex/magnesium transporter family protein transcript=eq;prot=eq; - 2 No
AT4G29870 ath Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT2G19340.2); Has 217 Blast hits to 217 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).;Oligosaccharyltransferase complex/magnesium transporter family protein transcript=eq;prot=eq; + 4 No
BD3G11020 bdi pid=Bradi3g11020.1;tid=Bradi3g11020.1;GeneName=Bradi3g11020;transcript=eq;prot=eq - Bd3 No
CP00115G00590 cpa name=evm.TU.supercontig_115.59;pid=evm.TU.supercontig_115.59;prot=eq;transcript=eq + supercontig_115 No
CR12G09350 cre name=pasa_Sanger_mRNA9152;pid=426925;prot=eq;tid=399430;transcript=eq - chromosome_12 No
FV5G23210 fve Oligosaccharyltransferase complex subunit OSTC (probable) transcript=eq;prot=eq;pid=gene12319 + LG5 No
GM09G06930 gma 09 pid=16275032;transcript=eq;prot=eq;name=Glyma09g06930.1 - Gm09 No
GM15G18220 gma 15 pid=16299181;transcript=eq;prot=eq;name=Glyma15g18220.1 - Gm15 No
GM20G19580 gma 20 pid=16316208;transcript=eq;prot=eq;name=Glyma20g19580.1 + Gm20 No
LJ0G439020 lja prot=eq;transcript=eq;scaffold=LjT46F23;name=LjT46F23.90.nd + chr0 No
MD00G056160 mdo transcript=eq;prot=eq;pid=MDP0000836404;tid=MDP0000836404;contig=MDC002349.234 + MDC002349.234 No
MD00G289890 mdo transcript=eq;prot=eq;pid=MDP0000387146;tid=MDP0000387146;contig=MDC012380.176 - MDC012380.176 No
ME03428G00070 mes PACid=17992808;RNAname=cassava4.1_017839m;GeneName=cassava4.1_017839m.g;transcript=eq;prot=eq + scaffold03428 No
ME07043G00010 mes PACid=17990555;RNAname=cassava4.1_017853m;GeneName=cassava4.1_017853m.g;transcript=eq;prot=eq + scaffold07043 No
MT2G038390 mtr Oligosaccharyltransferase complex subunit OSTC (AHRD V1 ***- Q5ZJR3); contains Interpro domain(s) IPR001611 Leucine-rich repeat transcript=eq;prot=eq;pid=Medtr2g038390.1; - 2 No
OS02G21080 osa AGAP008475%2DPA, putative, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_02G20010 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC013547; + Chr02 No
PT06G07000 ptr PACid=17305204;name=POPTR_0006s07190;alias=pt018860m,eugene3.00060597; transcript=eq;prot=eq;protein_id=17305204; + scaffold_6 No
PT18G12680 ptr PACid=17338490;name=POPTR_0018s13630;alias=pt009127m,eugene3.00181222; transcript=eq;prot=eq;protein_id=17338490; + scaffold_18 No
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