Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (1 gene)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (3 genes)



The gene family HOM005151 has 28 genes in 22 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G04510 aly name=fgenesh2_kg.3__448__AT3G04780.1;pid=477747;prot=eq;tid=477747 - scaffold_3 No
AT3G04780 ath Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein.;Protein of unknown function (DUF1000) transcript=eq;prot=eq; - 3 No
BD1G05580 bdi pid=Bradi1g05580.1;tid=Bradi1g05580.1;GeneName=Bradi1g05580;transcript=eq;prot=eq - Bd1 No
CR17G07170 cre name=kg.chromosome_17_#_1139_#_chlre3.68.11.2.11;pid=320733;prot=eq;tid=320740;transcript=eq + chromosome_17 No
FV0G25320 fve UPF0424 protein At3g04780 (similar to) transcript=eq;prot=eq;pid=gene16548 + scf0513168 No
GM10G30350 gma 10 pid=16280456;transcript=eq;prot=eq;name=Glyma10g30350.1 + Gm10 No
LJ0G114520 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_036193;name=LjSGA_036193.1 - LjSGA_036193 No
MD04G018110 mdo transcript=eq;prot=eq;pid=MDP0000202827;tid=MDP0000202827;contig=MDC013621.244 + 4 No
MD12G023770 mdo transcript=eq;prot=eq;pid=MDP0000160664;tid=MDP0000160664;contig=MDC002115.411 + 12 No
ME03614G03500 mes PACid=17965934;RNAname=cassava4.1_017474m;GeneName=cassava4.1_017474m.g;transcript=eq;prot=eq - scaffold03614 No
ME03802G00810 mes PACid=17989358;RNAname=cassava4.1_017523m;GeneName=cassava4.1_017523m.g;transcript=eq;prot=eq - scaffold03802 No
MRCC299_15G01090 mrcc299 name=e_gw2.15.265.1;pid=88535;prot=eq;tid=88535;transcript=eq - Chr_15 No
OL15G01990 olu NULL name=fgenesh1_pg.C_Chr_15000152,pid=18389,prot=eq,tid=18389 + Chr_15 No
OS03G58130 osa thioredoxin, putative, expressed transcript=eq;prot=eq; + 3 No
OSINDICA_03G55480 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008586; + Chr03 No
OT16G02450 ota Thioredoxin-like protein (ISS); name=OT16G02450;protein_id=CAL58244.1;prot=eq + chrom16 No
PP00041G00430 ppa NULL name=estExt_gwp_gw1.C_410064,pid=180265,prot=eq,tid=180265 - scaffold_41 No
PP00279G00140 ppa NULL name=fgenesh1_pm.scaffold_279000002,pid=60751,prot=eq,tid=60751 - scaffold_279 No
PT05G05180 ptr PACid=17327397;name=POPTR_0005s05370;alias=pt034010m,eugene3.00700078; transcript=eq;prot=eq;protein_id=17327397; + scaffold_5 No
PT13G03520 ptr PACid=17336979;name=POPTR_0013s03710;alias=pt031276m,estExt_Genewise1_v1.C_LG_XIII1459; transcript=eq;prot=eq;protein_id=17336979; + scaffold_13 No
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