Gene family  

Sub-families
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Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (3 genes)
mes
Manihot esculenta (1 gene)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (2 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
tca
Theobroma cacao (1 gene)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (1 gene)



The gene family HOM005130 has 28 genes in 23 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL4G00430 aly name=scaffold_400043.1;pid=900542;prot=eq;tid=932055 - scaffold_4 No
AT2G21280 ath A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; - 2 No
BD3G60920 bdi pid=Bradi3g60920.1;tid=Bradi3g60920.1;GeneName=Bradi3g60920;transcript=eq;prot=eq + Bd3 No
CP00150G00150 cpa name=evm.TU.supercontig_150.15;pid=evm.TU.supercontig_150.15;prot=eq;transcript=eq - supercontig_150 No
CR05G00570 cre name=au.g12006_t2;pid=294234;prot=eq;tid=294241;transcript=eq - chromosome_5 No
FV2G17330 fve Epimerase family protein slr1223 (probable) transcript=eq;prot=eq;pid=gene01662 + LG2 No
GM11G11750 gma 11 pid=16283544;transcript=eq;prot=eq;name=Glyma11g11750.1 - Gm11 No
GM12G04100 gma 12 pid=16286331;transcript=eq;prot=eq;name=Glyma12g04100.1 + Gm12 No
LJ3G034180 lja prot=eq;transcript=eq;scaffold=CM0216;name=chr3.CM0216.890.nc - chr3 No
MD00G003080 mdo transcript=eq;prot=eq;pid=MDP0000135084;tid=MDP0000135084;contig=MDC000131.169 - MDC000131.169 No
MD00G156420 mdo transcript=eq;prot=eq;pid=MDP0000950218;tid=MDP0000950218;contig=MDC006721.73 - MDC006721.73 No
MD10G008560 mdo transcript=eq;prot=eq;pid=MDP0000330474;tid=MDP0000330474;contig=MDC003471.571 - 10 No
ME02994G00110 mes PACid=17961180;RNAname=cassava4.1_010889m;GeneName=cassava4.1_010889m.g;transcript=eq;prot=eq - scaffold02994 No
MRCC299_05G03530 mrcc299 name=fgenesh2_pg.C_Chr_05000240;pid=100547;prot=eq;tid=100547;transcript=eq + Chr_05 No
MRCC299_06G04740 mrcc299 name=e_gw2.06.487.1;pid=82786;prot=eq;tid=82786;transcript=eq + Chr_06 No
MT4G071960 mtr cDNA clone J013124G04 full insert sequence (AHRD V1 ***- B7EE89_ORYSJ); contains Interpro domain(s) IPR010099 Sugar nucleotide epimerase YfcH, putative transcript=eq;prot=eq;pid=Medtr4g071960.1; - 4 No
MT4G072040 mtr cDNA clone J013124G04 full insert sequence (AHRD V1 ***- B7EE89_ORYSJ); contains Interpro domain(s) IPR010099 Sugar nucleotide epimerase YfcH, putative transcript=eq;prot=eq;pid=Medtr4g072040.1; - 4 No
OL05G02380 olu NULL name=e_gwEuk.5.288.1,pid=38921,prot=eq,tid=38921 - Chr_5 No
OS02G58790 osa cell division inhibitor, putative, expressed transcript=eq;prot=eq; + 2 No
OSINDICA_00G25220 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC046524; + Scaffold009032 No
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