Gene family  

Sub-families
ORTHO006347 (24 genes in 19 species)
ORTHO057869 (2 genes in 2 species)
ORTHO060769 (2 genes in 2 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (1 gene)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
lja
Lotus japonicus (1 gene)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (1 gene)
osaindica
Oryza sativa ssp. indica (1 gene)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (2 genes)
sbi
Sorghum bicolor (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM005075 has 28 genes in 21 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL2G17330 aly name=fgenesh2_kg.2__1165__AT1G69060.1;pid=476035;prot=eq;tid=476035 + scaffold_2 No
AT1G69060 ath Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 3526 Blast hits to 2426 proteins in 300 species: Archae - 4; Bacteria - 245; Metazoa - 1133; Fungi - 271; Plants - 159; Viruses - 2; Other Eukaryotes - 1712 (source: NCBI BLink).;Chaperone DnaJ-domain superfamily protein transcript=eq;prot=eq; + 1 No
BD1G08350 bdi pid=Bradi1g08350.1;tid=Bradi1g08350.1;GeneName=Bradi1g08350;transcript=eq;prot=eq - Bd1 No
CP00001G01610 cpa name=evm.TU.supercontig_1.161;pid=evm.TU.supercontig_1.161;prot=eq;transcript=eq - supercontig_1 No
FV0G03480 fve Protein starmaker, Precursor (probable) transcript=eq;prot=eq;pid=gene04544 + scf0513158 No
GM01G08230 gma 01 pid=16243788;transcript=eq;prot=eq;name=Glyma01g08230.1 - Gm01 No
GM02G13520 gma 02 pid=16247970;transcript=eq;prot=eq;name=Glyma02g13520.1 - Gm02 No
LJ0G253360 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_084218;name=LjSGA_084218.1 - LjSGA_084218 No
MD00G293880 mdo transcript=eq;prot=eq;pid=MDP0000427172;tid=MDP0000427172;contig=MDC012537.136 - MDC012537.136 No
MD16G002630 mdo transcript=eq;prot=eq;pid=MDP0000510763;tid=MDP0000510763;contig=MDC002877.495 + 16 No
ME08359G01340 mes PACid=17968937;RNAname=cassava4.1_007318m;GeneName=cassava4.1_007318m.g;transcript=eq;prot=eq + scaffold08359 No
ME08860G00020 mes PACid=17983290;RNAname=cassava4.1_003392m;GeneName=cassava4.1_003392m.g;transcript=eq;prot=eq + scaffold08860 No
MT5G047140 mtr F4N2.3 (AHRD V1 *-*- Q9LQB4_ARATH) transcript=eq;prot=eq;pid=Medtr5g047140.1; - 5 No
OL12G02640 olu NULL name=eugene.1200010258,pid=26913,prot=eq,tid=26913 - Chr_12 No
OS03G54150 osa expressed protein transcript=eq;prot=eq; + 3 No
OSINDICA_03G52020 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC008352; + Chr03 No
OT12G02650 ota EDR1 (ISS); name=OT12G02650;protein_id=CAL57357.1;prot=eq - chrom12 No
PP00022G00820 ppa NULL name=estExt_fgenesh1_pg.C_220093,pid=160444,prot=eq,tid=160444 - scaffold_22 No
PP00283G00510 ppa NULL name=estExt_fgenesh1_pg.C_2830056,pid=171283,prot=eq,tid=171283 + scaffold_283 No
PT08G10660 ptr PACid=17322920;name=POPTR_0008s10850;alias=pt026619m; transcript=eq;prot=eq;protein_id=17322920; - scaffold_8 No
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