Gene family  

Sub-families
ORTHO010201 (19 genes in 17 species)
ORTHO047066 (2 genes in 2 species)
ORTHO057168 (2 genes in 1 species)
View all sub-families (3)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (2 genes)
fve
Fragaria vesca (1 gene)
gma
Glycine max (2 genes)
mdo
Malus domestica (4 genes)
mes
Manihot esculenta (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (1 gene)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (2 genes)



The gene family HOM005044 has 28 genes in 17 species (0 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 28 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G13780 aly name=scaffold_601416.1;pid=909359;prot=eq;tid=940872 + scaffold_6 No
AT5G14030 ath translocon-associated protein beta (TRAPB) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translocon-associated beta (InterPro:IPR008856); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;translocon-associated protein beta (TRAPB) family protein transcript=eq;prot=eq; + 5 No
BD2G03687 bdi pid=Bradi2g03687.2;tid=Bradi2g03687.2;GeneName=Bradi2g03687;transcript=eq;prot=eq + Bd2 No
BD2G39960 bdi pid=Bradi2g39960.1;tid=Bradi2g39960.1;GeneName=Bradi2g39960;transcript=eq;prot=eq + Bd2 No
CP00004G01120 cpa name=evm.TU.supercontig_4.112;pid=evm.TU.supercontig_4.112;prot=eq;transcript=eq - supercontig_4 No
CP00070G00930 cpa name=evm.TU.supercontig_70.93;pid=evm.TU.supercontig_70.93;prot=eq;transcript=eq - supercontig_70 No
FV6G51580 fve Translocon-associated protein subunit beta (TRAP-beta), Precursor (probable) transcript=eq;prot=eq;pid=gene01373 + LG6 No
GM16G05530 gma 16 pid=16301585;transcript=eq;prot=eq;name=Glyma16g05530.1 - Gm16 No
GM19G27250 gma 19 pid=16312958;transcript=eq;prot=eq;name=Glyma19g27250.1 + Gm19 No
MD00G317890 mdo transcript=eq;prot=eq;pid=MDP0000242101;tid=MDP0000242101;contig=MDC013464.188 + MDC013464.188 No
MD00G462040 mdo transcript=eq;prot=eq;pid=MDP0000245446;tid=MDP0000245446;contig=MDC021376.72 - MDC021376.72 No
MD09G000500 mdo transcript=eq;prot=eq;pid=MDP0000163104;tid=MDP0000163104;contig=MDC001494.456 - 9 No
MD17G000370 mdo transcript=eq;prot=eq;pid=MDP0000263586;tid=MDP0000263586;contig=MDC002619.349 - 17 No
ME00363G00050 mes PACid=17976108;RNAname=cassava4.1_016629m;GeneName=cassava4.1_016629m.g;transcript=eq;prot=eq - scaffold00363 No
ME05432G00140 mes PACid=17991315;RNAname=cassava4.1_016374m;GeneName=cassava4.1_016374m.g;transcript=eq;prot=eq + scaffold05432 No
MT7G083560 mtr Translocon-associated protein subunit beta (AHRD V1 ***- P23438); contains Interpro domain(s) IPR008856 Translocon-associated beta transcript=eq;prot=eq;pid=Medtr7g083560.1; + 7 No
OS01G01307 osa translocon%2Dassociated protein beta domain containing protein, expressed transcript=eq;prot=eq; + 1 No
OS05G01262 osa translocon%2Dassociated protein beta domain containing protein, expressed transcript=eq;prot=eq; - 5 No
OSINDICA_05G00250 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC019371; - Chr05 No
PT01G32310 ptr PACid=17306546;name=POPTR_0001s33070;alias=pt040272m,estExt_fgenesh4_pg.C_LG_I2376; transcript=eq;prot=eq;protein_id=17306546; - scaffold_1 No
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