Gene family  

Sub-families
No subfamilies present
 
Keywords


Overview of gene family content




ath
Arabidopsis thaliana (3 genes)
gma
Glycine max (3 genes)
lja
Lotus japonicus (3 genes)
mdo
Malus domestica (1 gene)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (1 gene)
osa
Oryza sativa ssp. japonica (3 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (1 gene)
ptr
Populus trichocarpa (1 gene)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (1 gene)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (2 genes)
vvi
Vitis vinifera (2 genes)
zma
Zea mays (1 gene)



The gene family HOM004989 has 29 genes in 17 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AT2G07741 ath ATPase, F0 complex, subunit A protein; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, hydrogen ion transporting ATP synthase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: proton-transporting ATP synthase complex, coupling factor F(o), membrane; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit A (InterPro:IPR000568); BEST Arabidopsis thaliana protein match is: ATPase subunit 6-1 (TAIR:ATMG00410.1); Has 33502 Blast hits to 33498 proteins in 7990 species: Archae - 5; Bacteria - 5045; Metazoa - 23836; Fungi - 1157; Plants - 873; Viruses - 0; Other Eukaryotes - 2586 (source: NCBI BLink).;ATPase, F0 complex, subunit A protein transcript=eq;prot=eq; + 2 No
ATMG00410 ath ATPase subunit 6;ATPase subunit 6-1 transcript=eq;prot=eq; + mitochondrial No
ATMG01170 ath ATPase subunit 6;ATPase, F0 complex, subunit A protein transcript=eq;prot=eq; - mitochondrial No
GM00G00860 gma 859 pid=16269420;transcript=eq;prot=eq;name=Glyma0859s00200.1 + scaffold_859 Yes
GM00G00865 gma 859 pid=16269421;transcript=eq;prot=eq;name=Glyma0859s00200.2 + scaffold_859 No
GM00G00890 gma 950 pid=16274265;transcript=eq;prot=eq;name=Glyma0950s00200.1 + scaffold_950 No
LJ0G000660 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_000307;name=LjSGA_000307.2 + LjSGA_000307 No
LJ0G000670 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_000308;name=LjSGA_000308.0.1 + LjSGA_000308 No
LJ0G313270 lja partial;prot=eq;transcript=eq;scaffold=LjSGA_109270;name=LjSGA_109270.0.1 + LjSGA_109270 No
MD16G010990 mdo transcript=eq;prot=eq;pid=MDP0000775352;tid=MDP0000775352;contig=MDC007046.377 + 16 No
MRCC299_MG00170 mrcc299 atp6_1;ATPase subunit 6.1;protein_id=ACO55587.1; - mitochondrial No
MRCC299_MG00330 mrcc299 atp6_2;ATPase subunit 6.2;protein_id=ACO55599.1; + mitochondrial No
MT8G077470 mtr ATP synthase subunit a (AHRD V1 *-*- Q9TGX4_SOLTU) transcript=eq;prot=eq;pid=Medtr8g077470.1; + 8 No
OS01G58010 osa ATP synthase, A subunit family protein, putative transcript=eq;prot=eq; + 1 No
OS12G23610 osa ATP synthase, A subunit family protein, putative transcript=eq;prot=eq; - 12 No
OSINDICA_00G06830 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFSC047876; + Scaffold028319 Yes
OSINDICA_MG00460 osaindica atp6;ATP synthase F0 subunit 6;protein_id=AAZ99282.1; - mitochondrial No
OSMG00440 osa atp6;ATP synthase F0 subunit 6;protein_id=AAZ99389.1; - mitochondrial No
OTMG00530 ota protein_id=CAL36416.1; atp6; - mitochondrial No
PPMG00450 ppa atp6;ATP synthase F0 subunit 6;protein_id=BAE93093.1; transl_table=1; - mitochondrial No
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