Gene family  

Sub-families
ORTHO009535 (20 genes in 16 species)
ORTHO021752 (5 genes in 5 species)
View all sub-families (2)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (1 gene)
ath
Arabidopsis thaliana (1 gene)
bdi
Brachypodium distachyon (2 genes)
cpa
Carica papaya (1 gene)
fve
Fragaria vesca (1 gene)
gma
Glycine max (5 genes)
mdo
Malus domestica (2 genes)
mes
Manihot esculenta (2 genes)
osa
Oryza sativa ssp. japonica (2 genes)
osaindica
Oryza sativa ssp. indica (2 genes)
ptr
Populus trichocarpa (2 genes)
rco
Ricinus communis (1 gene)
sbi
Sorghum bicolor (2 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (2 genes)



The gene family HOM004882 has 29 genes in 17 species (1 outlier gene).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 29 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL6G29780 aly name=fgenesh1_pg.C_scaffold_6002479;pid=351886;prot=eq;tid=351886 - scaffold_6 No
AT4G07990 ath Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G18140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Chaperone DnaJ-domain superfamily protein transcript=eq;prot=eq; - 4 No
BD1G10000 bdi pid=Bradi1g10000.1;tid=Bradi1g10000.1;GeneName=Bradi1g10000;transcript=eq;prot=eq - Bd1 No
BD1G57546 bdi pid=Bradi1g57546.1;tid=Bradi1g57546.1;GeneName=Bradi1g57546;transcript=eq;prot=eq + Bd1 No
CP00160G00260 cpa name=evm.TU.supercontig_160.26;pid=evm.TU.supercontig_160.26;prot=eq;transcript=eq + supercontig_160 No
FV2G32200 fve Chaperone protein dnaJ (probable) transcript=eq;prot=eq;pid=gene02639 - LG2 No
GM00G00145 gma 41 pid=16242697;transcript=eq;prot=eq;name=Glyma0041s00270.1 - scaffold_41 No
GM04G05120 gma 04 pid=16254911;transcript=eq;prot=eq;name=Glyma04g05120.1 - Gm04 No
GM06G05210 gma 06 pid=16261783;transcript=eq;prot=eq;name=Glyma06g05210.1 - Gm06 No
GM07G24730 gma 07 pid=16267960;transcript=eq;prot=eq;name=Glyma07g24730.1 + Gm07 No
GM14G10300 gma 14 pid=16295045;transcript=eq;prot=eq;name=Glyma14g10300.1 - Gm14 No
MD09G010260 mdo transcript=eq;prot=eq;pid=MDP0000127659;tid=MDP0000127659;contig=MDC013253.238 + 9 No
MD15G001400 mdo transcript=eq;prot=eq;pid=MDP0000152703;tid=MDP0000152703;contig=MDC019308.218 + 15 No
ME03299G00100 mes PACid=17968491;RNAname=cassava4.1_015009m;GeneName=cassava4.1_015009m.g;transcript=eq;prot=eq + scaffold03299 No
ME09127G00020 mes PACid=17962877;RNAname=cassava4.1_015073m;GeneName=cassava4.1_015073m.g;transcript=eq;prot=eq + scaffold09127 No
OS03G51830 osa heat shock protein DnaJ, putative, expressed transcript=eq;prot=eq; + 3 No
OS07G03270 osa heat shock protein DnaJ, putative, expressed transcript=eq;prot=eq; - 7 No
OSINDICA_03G37790 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC007406; + Chr03 No
OSINDICA_07G02230 osaindica source=BGI China;type=FgeneSH; transcript=eq;prot=eq;name=OsIFCC022451; - Chr07 No
PT02G11340 ptr PACid=17324148;name=POPTR_0002s11530;alias=pt021415m,gw1.II.4133.1; transcript=eq;prot=eq;protein_id=17324148; - scaffold_2 No
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